Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COPB1P53618 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.76□□□□□ -1.49
COPB1P53618 AGGF1P5-201ENST00000567900 919 ntBASIC5.76□□□□□ -1.49
COPB1P53618 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.76□□□□□ -1.49
COPB1P53618 RBM22P1-201ENST00000578589 1214 ntBASIC5.76□□□□□ -1.49
COPB1P53618 AC119501.1-201ENST00000603646 475 ntBASIC5.76□□□□□ -1.49
COPB1P53618 AC008814.1-201ENST00000603797 406 ntBASIC5.76□□□□□ -1.49
COPB1P53618 QTRT1P1-201ENST00000604344 1078 ntBASIC5.76□□□□□ -1.49
COPB1P53618 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.76□□□□□ -1.49
COPB1P53618 AC138965.3-201ENST00000623875 498 ntBASIC5.76□□□□□ -1.49
COPB1P53618 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.76□□□□□ -1.49
COPB1P53618 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.76□□□□□ -1.49
COPB1P53618 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.76□□□□□ -1.49
COPB1P53618 AC073869.10-201ENST00000642016 354 ntBASIC5.76□□□□□ -1.49
COPB1P53618 SAMMSON-227ENST00000642114 1199 ntBASIC5.76□□□□□ -1.49
COPB1P53618 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.76□□□□□ -1.49
COPB1P53618 HSPD1P14-201ENST00000432666 1618 ntBASIC5.76□□□□□ -1.49
COPB1P53618 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COPB1P53618 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COPB1P53618 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 RNA5SP234-201ENST00000363916 119 ntBASIC5.75□□□□□ -1.49
COPB1P53618 RNA5SP242-201ENST00000364171 118 ntBASIC5.75□□□□□ -1.49
COPB1P53618 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.75□□□□□ -1.49
COPB1P53618 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.75□□□□□ -1.49
COPB1P53618 AL390119.1-201ENST00000440329 312 ntBASIC5.75□□□□□ -1.49
COPB1P53618 RPL7P33-201ENST00000444159 742 ntBASIC5.75□□□□□ -1.49
COPB1P53618 CYCSP24-201ENST00000445119 316 ntBASIC5.75□□□□□ -1.49
COPB1P53618 RPL36AP39-201ENST00000445859 318 ntBASIC5.75□□□□□ -1.49
COPB1P53618 MTCYBP11-201ENST00000447254 1109 ntBASIC5.75□□□□□ -1.49
COPB1P53618 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.75□□□□□ -1.49
COPB1P53618 YWHAEP1-201ENST00000453697 763 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.75□□□□□ -1.49
COPB1P53618 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.75□□□□□ -1.49
COPB1P53618 RN7SL189P-201ENST00000468631 289 ntBASIC5.75□□□□□ -1.49
COPB1P53618 RPS26P24-201ENST00000497656 331 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AC090638.1-201ENST00000498296 909 ntBASIC5.75□□□□□ -1.49
COPB1P53618 HMGB1P3-201ENST00000502802 616 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AC069306.1-201ENST00000507006 843 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.75□□□□□ -1.49
COPB1P53618 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 AC006427.1-201ENST00000514359 712 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.75□□□□□ -1.49
COPB1P53618 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.75□□□□□ -1.49
COPB1P53618 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.75□□□□□ -1.49
COPB1P53618 AC051619.2-201ENST00000559063 397 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.75□□□□□ -1.49
COPB1P53618 MIR4505-201ENST00000582238 73 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AC010487.1-201ENST00000594408 1172 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AP001160.4-201ENST00000596971 382 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AF230666.2-201ENST00000602328 725 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AC098935.2-201ENST00000604222 466 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AP005229.2-201ENST00000609980 697 ntBASIC5.75□□□□□ -1.49
COPB1P53618 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 AC126544.2-201ENST00000625174 749 ntBASIC5.75□□□□□ -1.49
COPB1P53618 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 CASC19-248ENST00000641674 1356 ntBASIC5.75□□□□□ -1.49
COPB1P53618 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COPB1P53618 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
COPB1P53618 AC100778.3-201ENST00000580060 1750 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AC006484.1-201ENST00000435086 1884 ntBASIC5.75□□□□□ -1.49
COPB1P53618 AP005432.1-201ENST00000580891 3485 ntBASIC5.75□□□□□ -1.49
COPB1P53618 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
COPB1P53618 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 OR9K1P-202ENST00000641111 3217 ntBASIC5.74□□□□□ -1.49
COPB1P53618 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COPB1P53618 RNU1-146P-201ENST00000364015 165 ntBASIC5.74□□□□□ -1.49
COPB1P53618 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.74□□□□□ -1.49
COPB1P53618 RNA5SP487-201ENST00000410186 122 ntBASIC5.74□□□□□ -1.49
COPB1P53618 GTF2IP5-201ENST00000414608 731 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AL513325.1-201ENST00000417716 1034 ntBASIC5.74□□□□□ -1.49
COPB1P53618 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.74□□□□□ -1.49
COPB1P53618 AL121776.1-201ENST00000429337 372 ntBASIC5.74□□□□□ -1.49
COPB1P53618 PTP4A1P3-201ENST00000433661 420 ntBASIC5.74□□□□□ -1.49
COPB1P53618 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.74□□□□□ -1.49
COPB1P53618 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms