Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDX1P52945 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PDX1P52945 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.04□□□□□ -1.6
PDX1P52945 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDX1P52945 CASC19-221ENST00000641309 1382 ntBASIC5.04□□□□□ -1.6
PDX1P52945 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PDX1P52945 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.03□□□□□ -1.6
PDX1P52945 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 RN7SKP95-201ENST00000362860 303 ntBASIC5.03□□□□□ -1.6
PDX1P52945 SNORD51.1-201ENST00000365405 77 ntBASIC5.03□□□□□ -1.6
PDX1P52945 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 MIR600-201ENST00000385007 98 ntBASIC5.03□□□□□ -1.6
PDX1P52945 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PDX1P52945 MIR1182-201ENST00000408363 97 ntBASIC5.03□□□□□ -1.6
PDX1P52945 GJA6P-201ENST00000415117 1042 ntBASIC5.03□□□□□ -1.6
PDX1P52945 COX6B1P1-201ENST00000415962 213 ntBASIC5.03□□□□□ -1.6
PDX1P52945 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.03□□□□□ -1.6
PDX1P52945 DDX39BP1-205ENST00000422507 192 ntBASIC5.03□□□□□ -1.6
PDX1P52945 MTND4P24-201ENST00000424002 397 ntBASIC5.03□□□□□ -1.6
PDX1P52945 RPS4XP16-201ENST00000427198 791 ntBASIC5.03□□□□□ -1.6
PDX1P52945 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 AL606490.7-201ENST00000433136 191 ntBASIC5.03□□□□□ -1.6
PDX1P52945 ELOCP3-201ENST00000439303 348 ntBASIC5.03□□□□□ -1.6
PDX1P52945 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 AC073648.4-201ENST00000442655 781 ntBASIC5.03□□□□□ -1.6
PDX1P52945 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 AC009220.1-201ENST00000451614 275 ntBASIC5.03□□□□□ -1.6
PDX1P52945 RPL7P40-201ENST00000481703 745 ntBASIC5.03□□□□□ -1.6
PDX1P52945 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.03□□□□□ -1.6
PDX1P52945 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 AL671862.1-201ENST00000515851 349 ntBASIC5.03□□□□□ -1.6
PDX1P52945 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.03□□□□□ -1.6
PDX1P52945 OR4R2P-201ENST00000530815 597 ntBASIC5.03□□□□□ -1.6
PDX1P52945 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.03□□□□□ -1.6
PDX1P52945 MTND4LP25-201ENST00000570218 163 ntBASIC5.03□□□□□ -1.6
PDX1P52945 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.03□□□□□ -1.6
PDX1P52945 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.03□□□□□ -1.6
PDX1P52945 AC005252.1-201ENST00000604518 1063 ntBASIC5.03□□□□□ -1.6
PDX1P52945 AC092953.2-201ENST00000608000 699 ntBASIC5.03□□□□□ -1.6
PDX1P52945 AC244107.2-201ENST00000611773 76 ntBASIC5.03□□□□□ -1.6
PDX1P52945 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 AC110792.3-201ENST00000595906 1614 ntBASIC5.03□□□□□ -1.6
PDX1P52945 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDX1P52945 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDX1P52945 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PDX1P52945 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PDX1P52945 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDX1P52945 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PDX1P52945 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PDX1P52945 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.02□□□□□ -1.61
PDX1P52945 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 AC012618.3-205ENST00000637896 1496 ntBASIC5.02□□□□□ -1.61
PDX1P52945 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDX1P52945 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.02□□□□□ -1.61
PDX1P52945 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDX1P52945 MIR141-201ENST00000384975 95 ntBASIC5.02□□□□□ -1.61
PDX1P52945 HSPA8P15-201ENST00000401676 786 ntBASIC5.02□□□□□ -1.61
PDX1P52945 AL356057.1-202ENST00000402263 756 ntBASIC5.02□□□□□ -1.61
PDX1P52945 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
PDX1P52945 OR2AM1P-201ENST00000422137 422 ntBASIC5.02□□□□□ -1.61
PDX1P52945 REREP1Y-201ENST00000422655 198 ntBASIC5.02□□□□□ -1.61
PDX1P52945 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDX1P52945 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.02□□□□□ -1.61
PDX1P52945 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 MTND2P21-201ENST00000436242 1042 ntBASIC5.02□□□□□ -1.61
PDX1P52945 REREP2Y-201ENST00000439103 200 ntBASIC5.02□□□□□ -1.61
PDX1P52945 CEACAMP9-201ENST00000442990 513 ntBASIC5.02□□□□□ -1.61
PDX1P52945 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 AC093890.1-201ENST00000502554 540 ntBASIC5.02□□□□□ -1.61
PDX1P52945 MTCO1P31-201ENST00000506355 492 ntBASIC5.02□□□□□ -1.61
PDX1P52945 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 AC008033.2-201ENST00000542626 177 ntBASIC5.02□□□□□ -1.61
PDX1P52945 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.02□□□□□ -1.61
PDX1P52945 AC063949.1-201ENST00000552900 865 ntBASIC5.02□□□□□ -1.61
PDX1P52945 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.02□□□□□ -1.61
PDX1P52945 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.02□□□□□ -1.61
PDX1P52945 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.02□□□□□ -1.61
PDX1P52945 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.02□□□□□ -1.61
PDX1P52945 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.02□□□□□ -1.61
PDX1P52945 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms