Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 SMG1P6-201ENST00000532337 2930 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC4.99□□□□□ -1.61
BRCA2P51587 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
BRCA2P51587 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 VN1R37P-201ENST00000419096 748 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 AC025164.1-201ENST00000496249 478 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 AL445363.3-201ENST00000623080 671 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.99□□□□□ -1.61
BRCA2P51587 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 AC120036.2-201ENST00000509729 1474 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.99□□□□□ -1.61
BRCA2P51587 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 AP001002.1-201ENST00000625148 1513 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 RNA5SP432-201ENST00000362480 116 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 EIF4A1P3-201ENST00000411521 244 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 AC236972.1-201ENST00000433225 199 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 MRPS21P3-201ENST00000436696 262 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 PRELID3BP6-201ENST00000503839 571 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 AC010460.1-201ENST00000507087 466 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 AP000619.3-201ENST00000535634 1127 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.99□□□□□ -1.61
BRCA2P51587 AL391261.4-201ENST00000616012 481 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 AP005019.3-201ENST00000620418 560 ntBASIC4.99□□□□□ -1.61
BRCA2P51587 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
BRCA2P51587 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.99□□□□□ -1.61
BRCA2P51587 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRCA2P51587 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.99□□□□□ -1.61
BRCA2P51587 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA2P51587 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
BRCA2P51587 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.98□□□□□ -1.61
BRCA2P51587 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC107982.3-201ENST00000584957 985 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AC015967.1-201ENST00000619893 476 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC092451.3-201ENST00000625067 1343 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA2P51587 MIR183-201ENST00000384958 110 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.98□□□□□ -1.61
BRCA2P51587 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.98□□□□□ -1.61
BRCA2P51587 COX6CP13-201ENST00000428703 226 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC090142.1-201ENST00000465776 462 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.98□□□□□ -1.61
BRCA2P51587 RN7SL290P-201ENST00000578661 300 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AL162574.1-201ENST00000615702 950 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA2P51587 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC009951.1-201ENST00000623674 2614 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA2P51587 AC011447.7-201ENST00000624228 1590 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AC073342.2-201ENST00000595842 1800 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
BRCA2P51587 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA2P51587 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.98□□□□□ -1.61
BRCA2P51587 AC016772.1-201ENST00000444170 1261 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.98□□□□□ -1.61
BRCA2P51587 RPL23AP94-201ENST00000512518 302 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.98□□□□□ -1.61
BRCA2P51587 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.98□□□□□ -1.61
BRCA2P51587 SRGNP1-201ENST00000603392 451 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA2P51587 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRCA2P51587 AC007382.1-201ENST00000624376 2618 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 AC107068.1-201ENST00000563286 4218 ntBASIC4.98□□□□□ -1.61
BRCA2P51587 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.97□□□□□ -1.61
BRCA2P51587 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC4.97□□□□□ -1.61
BRCA2P51587 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
BRCA2P51587 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.97□□□□□ -1.61
BRCA2P51587 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.97□□□□□ -1.61
BRCA2P51587 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.97□□□□□ -1.61
BRCA2P51587 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.97□□□□□ -1.61
BRCA2P51587 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.97□□□□□ -1.61
BRCA2P51587 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.97□□□□□ -1.61
BRCA2P51587 MIR6891-201ENST00000618788 93 ntBASIC4.97□□□□□ -1.61
BRCA2P51587 AC000095.2-202ENST00000637415 154 ntBASIC4.97□□□□□ -1.61
BRCA2P51587 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRCA2P51587 AL122016.1-201ENST00000403365 367 ntBASIC4.97□□□□□ -1.61
BRCA2P51587 AP000907.1-201ENST00000428428 510 ntBASIC4.97□□□□□ -1.61
BRCA2P51587 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms