Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX3P41225 AL592494.3-201ENST00000609485 464 ntBASIC4.79□□□□□ -1.64
SOX3P41225 Z95327.3-201ENST00000610385 572 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC080188.3-201ENST00000624842 748 ntBASIC4.79□□□□□ -1.64
SOX3P41225 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX3P41225 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX3P41225 DDX6P1-205ENST00000441966 1436 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC092111.2-201ENST00000611627 1414 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC083843.2-201ENST00000568248 6253 ntBASIC4.79□□□□□ -1.64
SOX3P41225 AC023421.1-201ENST00000590535 1785 ntBASIC4.78□□□□□ -1.64
SOX3P41225 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 SNORA58B-201ENST00000364259 136 ntBASIC4.78□□□□□ -1.64
SOX3P41225 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 MIR589-201ENST00000385238 99 ntBASIC4.78□□□□□ -1.64
SOX3P41225 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.78□□□□□ -1.64
SOX3P41225 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 AL357078.2-201ENST00000416486 427 ntBASIC4.78□□□□□ -1.64
SOX3P41225 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX3P41225 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 CEACAMP7-201ENST00000444105 496 ntBASIC4.78□□□□□ -1.64
SOX3P41225 DNAJB5P1-201ENST00000454004 806 ntBASIC4.78□□□□□ -1.64
SOX3P41225 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 AC108161.1-201ENST00000461060 402 ntBASIC4.78□□□□□ -1.64
SOX3P41225 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX3P41225 RN7SL610P-201ENST00000463845 291 ntBASIC4.78□□□□□ -1.64
SOX3P41225 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 AC008410.1-201ENST00000483777 339 ntBASIC4.78□□□□□ -1.64
SOX3P41225 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
SOX3P41225 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX3P41225 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX3P41225 AL136520.1-202ENST00000555494 763 ntBASIC4.78□□□□□ -1.64
SOX3P41225 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX3P41225 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 BNIP3P41-202ENST00000616656 861 ntBASIC4.78□□□□□ -1.64
SOX3P41225 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 AC068870.2-201ENST00000620635 389 ntBASIC4.78□□□□□ -1.64
SOX3P41225 AC015660.5-201ENST00000623238 564 ntBASIC4.78□□□□□ -1.64
SOX3P41225 AP003499.2-201ENST00000624100 483 ntBASIC4.78□□□□□ -1.64
SOX3P41225 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 CASC19-222ENST00000641321 1173 ntBASIC4.78□□□□□ -1.64
SOX3P41225 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX3P41225 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 DDX18P6-201ENST00000450119 1997 ntBASIC4.78□□□□□ -1.64
SOX3P41225 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX3P41225 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SOX3P41225 AC063976.2-201ENST00000425667 3556 ntBASIC4.78□□□□□ -1.64
SOX3P41225 HSPA8P18-201ENST00000439846 1928 ntBASIC4.78□□□□□ -1.64
SOX3P41225 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX3P41225 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX3P41225 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.77□□□□□ -1.65
SOX3P41225 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
SOX3P41225 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX3P41225 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX3P41225 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SOX3P41225 TCP1P3-201ENST00000414406 1498 ntBASIC4.77□□□□□ -1.65
SOX3P41225 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SOX3P41225 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SOX3P41225 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX3P41225 RNA5SP305-201ENST00000362665 119 ntBASIC4.77□□□□□ -1.65
SOX3P41225 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX3P41225 AC093162.1-201ENST00000419682 124 ntBASIC4.77□□□□□ -1.65
SOX3P41225 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.77□□□□□ -1.65
SOX3P41225 AC073464.3-201ENST00000422564 712 ntBASIC4.77□□□□□ -1.65
SOX3P41225 AL034379.1-201ENST00000423216 253 ntBASIC4.77□□□□□ -1.65
SOX3P41225 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.77□□□□□ -1.65
SOX3P41225 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.77□□□□□ -1.65
SOX3P41225 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.77□□□□□ -1.65
SOX3P41225 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.77□□□□□ -1.65
SOX3P41225 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SOX3P41225 AP000949.1-201ENST00000438328 629 ntBASIC4.77□□□□□ -1.65
SOX3P41225 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms