Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5□□□□□ -1.61
FDFT1P37268 AC008758.3-201ENST00000507003 1829 ntBASIC5□□□□□ -1.61
FDFT1P37268 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 MAPK10-320ENST00000641462 6696 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
FDFT1P37268 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.99□□□□□ -1.61
FDFT1P37268 AC093775.1-201ENST00000624154 1868 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 RNA5SP428-201ENST00000365129 132 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
FDFT1P37268 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.99□□□□□ -1.61
FDFT1P37268 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.99□□□□□ -1.61
FDFT1P37268 RNA5SP296-201ENST00000410523 111 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.99□□□□□ -1.61
FDFT1P37268 OR13Z1P-201ENST00000416141 834 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AF186996.5-201ENST00000418098 904 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 RGS17P1-201ENST00000423358 553 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 MTCO1P51-201ENST00000427672 1060 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AC005033.1-201ENST00000428904 813 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.99□□□□□ -1.61
FDFT1P37268 AL137845.2-201ENST00000444292 988 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AC000111.2-201ENST00000448200 210 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AURKAPS1-201ENST00000451805 1212 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 CYCSP34-201ENST00000458172 304 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AC112206.1-201ENST00000468416 477 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.99□□□□□ -1.61
FDFT1P37268 RPS18P6-201ENST00000476880 458 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 RN7SL319P-201ENST00000480656 221 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.99□□□□□ -1.61
FDFT1P37268 RPS27AP18-201ENST00000515536 459 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.99□□□□□ -1.61
FDFT1P37268 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.99□□□□□ -1.61
FDFT1P37268 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.99□□□□□ -1.61
FDFT1P37268 SNORA74C-1-201ENST00000580726 201 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.99□□□□□ -1.61
FDFT1P37268 AC006453.5-201ENST00000636451 619 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.99□□□□□ -1.61
FDFT1P37268 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.99□□□□□ -1.61
FDFT1P37268 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
FDFT1P37268 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
FDFT1P37268 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.99□□□□□ -1.61
FDFT1P37268 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
FDFT1P37268 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.98□□□□□ -1.61
FDFT1P37268 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 SAMMSON-213ENST00000641336 1521 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 RNU6-1263P-201ENST00000384601 106 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 AL357515.1-201ENST00000402967 542 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 U3.35-201ENST00000408405 208 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.98□□□□□ -1.61
FDFT1P37268 RPS26P4-201ENST00000431743 355 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 AL163193.1-201ENST00000444895 788 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 AC116562.1-201ENST00000485355 781 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
FDFT1P37268 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.98□□□□□ -1.61
FDFT1P37268 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.98□□□□□ -1.61
FDFT1P37268 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.98□□□□□ -1.61
FDFT1P37268 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.98□□□□□ -1.61
FDFT1P37268 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.98□□□□□ -1.61
FDFT1P37268 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.98□□□□□ -1.61
FDFT1P37268 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.98□□□□□ -1.61
FDFT1P37268 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.98□□□□□ -1.61
FDFT1P37268 AC018552.1-201ENST00000562099 811 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 AC122134.1-201ENST00000565664 1104 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.98□□□□□ -1.61
FDFT1P37268 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.98□□□□□ -1.61
FDFT1P37268 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.98□□□□□ -1.61
FDFT1P37268 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.98□□□□□ -1.61
FDFT1P37268 AC022467.1-201ENST00000614738 749 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
FDFT1P37268 AP001273.1-201ENST00000624493 3152 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 SOCS5P3-201ENST00000425115 1576 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 CASC19-281ENST00000642118 1554 ntBASIC4.98□□□□□ -1.61
FDFT1P37268 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
FDFT1P37268 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.98□□□□□ -1.61
FDFT1P37268 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.98□□□□□ -1.61
FDFT1P37268 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FDFT1P37268 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms