Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC108161.1-201ENST00000461060 402 ntBASIC6.2□□□□□ -1.42
LTBRP36941 RPL7P1-201ENST00000468161 747 ntBASIC6.2□□□□□ -1.42
LTBRP36941 RPL7P9-201ENST00000468715 747 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AL355032.1-201ENST00000472981 438 ntBASIC6.2□□□□□ -1.42
LTBRP36941 RPS4XP1-201ENST00000482189 787 ntBASIC6.2□□□□□ -1.42
LTBRP36941 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.2□□□□□ -1.42
LTBRP36941 AC091965.2-201ENST00000512324 613 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC109445.1-201ENST00000512356 383 ntBASIC6.2□□□□□ -1.42
LTBRP36941 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.2□□□□□ -1.42
LTBRP36941 RNU6-678P-201ENST00000516832 109 ntBASIC6.2□□□□□ -1.42
LTBRP36941 MRPS16P1-201ENST00000523462 412 ntBASIC6.2□□□□□ -1.42
LTBRP36941 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LTBRP36941 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 AC073916.1-201ENST00000545095 130 ntBASIC6.2□□□□□ -1.42
LTBRP36941 HMGN2P6-201ENST00000551091 273 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC004825.1-201ENST00000555068 586 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.2□□□□□ -1.42
LTBRP36941 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.2□□□□□ -1.42
LTBRP36941 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.2□□□□□ -1.42
LTBRP36941 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.2□□□□□ -1.42
LTBRP36941 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.2□□□□□ -1.42
LTBRP36941 MIR3189-201ENST00000578735 73 ntBASIC6.2□□□□□ -1.42
LTBRP36941 RN7SL708P-201ENST00000580952 299 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 MIR3611-201ENST00000584484 83 ntBASIC6.2□□□□□ -1.42
LTBRP36941 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 NTAN1P1-201ENST00000603150 646 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC069545.1-201ENST00000605671 358 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC131235.4-201ENST00000609288 620 ntBASIC6.2□□□□□ -1.42
LTBRP36941 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC022306.2-201ENST00000617563 647 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC018755.4-201ENST00000619715 454 ntBASIC6.2□□□□□ -1.42
LTBRP36941 AC068870.2-201ENST00000620635 389 ntBASIC6.2□□□□□ -1.42
LTBRP36941 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.2□□□□□ -1.42
LTBRP36941 AC116618.1-201ENST00000634617 774 ntBASIC6.2□□□□□ -1.42
LTBRP36941 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LTBRP36941 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LTBRP36941 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.2□□□□□ -1.42
LTBRP36941 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 PRNCR1-201ENST00000635449 12727 ntBASIC6.2□□□□□ -1.42
LTBRP36941 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LTBRP36941 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 BIN2P1-201ENST00000504996 1530 ntBASIC6.2□□□□□ -1.42
LTBRP36941 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LTBRP36941 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LTBRP36941 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LTBRP36941 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LTBRP36941 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LTBRP36941 AC023421.1-201ENST00000590535 1785 ntBASIC6.19□□□□□ -1.42
LTBRP36941 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LTBRP36941 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.19□□□□□ -1.42
LTBRP36941 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LTBRP36941 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.19□□□□□ -1.42
LTBRP36941 MIR550A3-201ENST00000390735 95 ntBASIC6.19□□□□□ -1.42
LTBRP36941 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LTBRP36941 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LTBRP36941 RNA5SP80-201ENST00000410475 111 ntBASIC6.19□□□□□ -1.42
LTBRP36941 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 CEACAMP8-201ENST00000413902 580 ntBASIC6.19□□□□□ -1.42
LTBRP36941 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.19□□□□□ -1.42
LTBRP36941 CYP4F30P-202ENST00000420048 405 ntBASIC6.19□□□□□ -1.42
LTBRP36941 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.19□□□□□ -1.42
LTBRP36941 AL049610.1-201ENST00000423374 372 ntBASIC6.19□□□□□ -1.42
LTBRP36941 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.19□□□□□ -1.42
LTBRP36941 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.19□□□□□ -1.42
LTBRP36941 RPL23AP4-201ENST00000427757 463 ntBASIC6.19□□□□□ -1.42
LTBRP36941 CDY14P-201ENST00000431260 1014 ntBASIC6.19□□□□□ -1.42
LTBRP36941 MTCO1P19-201ENST00000443487 500 ntBASIC6.19□□□□□ -1.42
LTBRP36941 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.19□□□□□ -1.42
LTBRP36941 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.19□□□□□ -1.42
LTBRP36941 FAR2P1-206ENST00000449736 709 ntBASIC6.19□□□□□ -1.42
LTBRP36941 CDY23P-201ENST00000451661 1014 ntBASIC6.19□□□□□ -1.42
LTBRP36941 DNAJC19P8-201ENST00000452887 259 ntBASIC6.19□□□□□ -1.42
LTBRP36941 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.19□□□□□ -1.42
LTBRP36941 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.19□□□□□ -1.42
LTBRP36941 RPL35AP28-201ENST00000459730 331 ntBASIC6.19□□□□□ -1.42
LTBRP36941 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.19□□□□□ -1.42
LTBRP36941 AC115223.1-201ENST00000466377 870 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms