Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC083837.1-201ENST00000565297 2994 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXA13P31271 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA13P31271 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
HOXA13P31271 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXA13P31271 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXA13P31271 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA13P31271 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXA13P31271 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 RNU4-39P-201ENST00000362455 127 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXA13P31271 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 RPL10P10-201ENST00000403509 664 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 RN7SKP16-201ENST00000410180 299 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 AC019070.1-201ENST00000415008 1024 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 AC004074.1-201ENST00000421810 1063 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 PRPF38AP1-201ENST00000451976 933 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA13P31271 RN7SL441P-201ENST00000492388 296 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 FABP5P6-201ENST00000510588 409 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 AC067904.2-201ENST00000517322 1283 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXA13P31271 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXA13P31271 AC016839.1-201ENST00000578162 867 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 AC020910.3-201ENST00000603701 874 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 AC011453.2-201ENST00000603737 729 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 RMST_5.1-201ENST00000618704 126 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 AL356094.1-201ENST00000624663 1212 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.67□□□□□ -1.5
HOXA13P31271 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA13P31271 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA13P31271 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 ECM1P2-201ENST00000503354 1577 ntBASIC5.67□□□□□ -1.5
HOXA13P31271 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXA13P31271 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXA13P31271 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXA13P31271 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXA13P31271 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXA13P31271 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC007618.1-201ENST00000366455 732 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXA13P31271 HMGB3P7-201ENST00000400214 611 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 RPL37P18-201ENST00000411602 243 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 USP9YP19-201ENST00000412165 485 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXA13P31271 GTF2IP5-201ENST00000414608 731 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC234781.4-201ENST00000419384 244 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AC012497.1-201ENST00000429392 575 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 SCAND3P1-201ENST00000439854 1060 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXA13P31271 RPL23AP56-201ENST00000460778 453 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 GAPDHP56-201ENST00000506031 988 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AC097486.1-201ENST00000515331 210 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AL671862.1-201ENST00000515851 349 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 RN7SKP34-201ENST00000516142 244 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC100784.1-201ENST00000522790 310 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.66□□□□□ -1.5
HOXA13P31271 AL512310.9-201ENST00000553311 948 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXA13P31271 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXA13P31271 BGLT3-201ENST00000564523 994 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 AC092474.3-201ENST00000603022 568 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AP001521.2-201ENST00000608772 546 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXA13P31271 AC073592.7-201ENST00000623659 507 ntBASIC5.66□□□□□ -1.5
HOXA13P31271 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXA13P31271 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXA13P31271 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
HOXA13P31271 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXA13P31271 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXA13P31271 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms