Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AL133406.3-201ENST00000606817 541 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AP001005.3-201ENST00000622049 129 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 SALL4P2-201ENST00000423288 2910 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC139713.2-215ENST00000641428 5037 ntBASIC3.78□□□□□ -1.8
HLA-DMBP28068 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DMBP28068 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.78□□□□□ -1.81
HLA-DMBP28068 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
HLA-DMBP28068 AC027228.2-201ENST00000567141 2154 ntBASIC3.78□□□□□ -1.81
HLA-DMBP28068 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 SNORA17.1-201ENST00000362945 126 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 SCAND3P1-201ENST00000439854 1060 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 RPS17P2-201ENST00000461663 408 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 RN7SL329P-201ENST00000467740 299 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC093270.2-201ENST00000486157 792 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC109462.1-201ENST00000491087 368 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 ARL4AP1-201ENST00000503220 705 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 NDUFA5P12-201ENST00000503796 343 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AL512310.9-201ENST00000553311 948 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AL358913.1-201ENST00000554342 121 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC010547.7-201ENST00000570323 333 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 CYCSP40-201ENST00000575927 294 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC006116.3-201ENST00000592968 361 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC087763.1-201ENST00000603391 286 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AL445222.1-201ENST00000607259 628 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC090510.2-201ENST00000617465 629 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC010809.3-201ENST00000621310 641 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC006840.1-201ENST00000623069 542 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 OR14L1P-202ENST00000641545 3009 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC3.77□□□□□ -1.81
HLA-DMBP28068 AC009643.2-201ENST00000603543 1448 ntBASIC3.77□□□□□ -1.81
HLA-DMBP28068 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HLA-DMBP28068 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AL672167.1-203ENST00000641299 2975 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 SNORA73.1-201ENST00000363107 205 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 U3.36-201ENST00000408418 213 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 RN7SKP199-201ENST00000410325 305 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC093162.1-201ENST00000419682 124 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 RPL36AP10-201ENST00000421785 322 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 RPS26P4-201ENST00000431743 355 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DMBP28068 RPL34P20-201ENST00000442771 351 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC073850.1-201ENST00000449243 255 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 IGHV5-78-201ENST00000450948 295 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC092647.2-201ENST00000452998 253 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 GYG1P1-201ENST00000460864 698 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC073358.1-201ENST00000505671 684 ntBASIC3.76□□□□□ -1.81
HLA-DMBP28068 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DMBP28068 RPL23AP53-201ENST00000521854 457 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms