Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.45□□□□□ -1.06
PTPREP23469 RPL34P27-201ENST00000428810 349 ntBASIC8.45□□□□□ -1.06
PTPREP23469 ATP5JP1-201ENST00000431631 322 ntBASIC8.45□□□□□ -1.06
PTPREP23469 PPIAP17-201ENST00000438507 471 ntBASIC8.45□□□□□ -1.06
PTPREP23469 CACYBPP1-201ENST00000438592 684 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.45□□□□□ -1.06
PTPREP23469 ST13P21-201ENST00000453250 1098 ntBASIC8.45□□□□□ -1.06
PTPREP23469 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPREP23469 AC112204.1-201ENST00000502591 103 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC006390.1-201ENST00000508068 283 ntBASIC8.45□□□□□ -1.06
PTPREP23469 NACAP6-201ENST00000509572 622 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 SMURF2P1-201ENST00000514992 481 ntBASIC8.45□□□□□ -1.06
PTPREP23469 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPREP23469 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 IGKV2-29-201ENST00000521304 372 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AP001189.2-201ENST00000527320 189 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPREP23469 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPREP23469 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPREP23469 AC104785.1-201ENST00000603220 588 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AL031777.2-201ENST00000611953 196 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC244517.12-201ENST00000623581 663 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC211433.3-201ENST00000623770 375 ntBASIC8.45□□□□□ -1.06
PTPREP23469 AC063952.1-203ENST00000634410 658 ntBASIC8.45□□□□□ -1.06
PTPREP23469 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PTPREP23469 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PTPREP23469 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
PTPREP23469 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPREP23469 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.45□□□□□ -1.06
PTPREP23469 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PTPREP23469 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.45□□□□□ -1.06
PTPREP23469 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPREP23469 AP003471.1-202ENST00000319051 1988 ntBASIC8.44□□□□□ -1.06
PTPREP23469 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPREP23469 MAPK6PS2-201ENST00000379571 2060 ntBASIC8.44□□□□□ -1.06
PTPREP23469 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 AC073343.1-201ENST00000328239 651 ntBASIC8.44□□□□□ -1.06
PTPREP23469 RNA5SP114-201ENST00000363780 113 ntBASIC8.44□□□□□ -1.06
PTPREP23469 RN7SKP6-201ENST00000364795 319 ntBASIC8.44□□□□□ -1.06
PTPREP23469 SNORD3H-201ENST00000384486 214 ntBASIC8.44□□□□□ -1.06
PTPREP23469 Y_RNA.557-201ENST00000384680 107 ntBASIC8.44□□□□□ -1.06
PTPREP23469 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PTPREP23469 FAUP2-201ENST00000394301 401 ntBASIC8.44□□□□□ -1.06
PTPREP23469 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPREP23469 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.44□□□□□ -1.06
PTPREP23469 MTATP6P18-201ENST00000417994 673 ntBASIC8.44□□□□□ -1.06
PTPREP23469 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.44□□□□□ -1.06
PTPREP23469 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC8.44□□□□□ -1.06
PTPREP23469 OR51AB1P-201ENST00000429046 620 ntBASIC8.44□□□□□ -1.06
PTPREP23469 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC8.44□□□□□ -1.06
PTPREP23469 AC012512.1-201ENST00000446594 718 ntBASIC8.44□□□□□ -1.06
PTPREP23469 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC8.44□□□□□ -1.06
PTPREP23469 DNAJC19P8-201ENST00000452887 259 ntBASIC8.44□□□□□ -1.06
PTPREP23469 MTCO3P10-201ENST00000455912 772 ntBASIC8.44□□□□□ -1.06
PTPREP23469 RPSAP48-201ENST00000466509 889 ntBASIC8.44□□□□□ -1.06
PTPREP23469 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.44□□□□□ -1.06
PTPREP23469 AP005902.2-201ENST00000518393 307 ntBASIC8.44□□□□□ -1.06
PTPREP23469 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC8.44□□□□□ -1.06
PTPREP23469 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.44□□□□□ -1.06
PTPREP23469 PCNAP4-201ENST00000532690 730 ntBASIC8.44□□□□□ -1.06
PTPREP23469 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC8.44□□□□□ -1.06
PTPREP23469 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPREP23469 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPREP23469 CYP2C61P-201ENST00000604072 290 ntBASIC8.44□□□□□ -1.06
PTPREP23469 MIR6889-201ENST00000613185 59 ntBASIC8.44□□□□□ -1.06
PTPREP23469 AC099494.2-201ENST00000623371 978 ntBASIC8.44□□□□□ -1.06
PTPREP23469 AL132796.3-201ENST00000624703 900 ntBASIC8.44□□□□□ -1.06
PTPREP23469 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPREP23469 AC135068.12-201ENST00000637370 931 ntBASIC8.44□□□□□ -1.06
PTPREP23469 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPREP23469 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms