| PTPN2 | P17706 | RNU6-650P-201 | ENST00000365658 | 111 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | SPATA42-201 | ENST00000369989 | 535 nt | TSL 1 (best) BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | GCNT6-201 | ENST00000379591 | 934 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | DBIP1-201 | ENST00000401435 | 260 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL353692.2-201 | ENST00000407054 | 335 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | Y_RNA.625-201 | ENST00000411256 | 107 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | ITGA9-AS1-203 | ENST00000429532 | 702 nt | TSL 5 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC006326.1-201 | ENST00000445465 | 787 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | MTND2P6-201 | ENST00000455337 | 1030 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL589703.1-201 | ENST00000456032 | 256 nt | TSL 5 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC069304.1-201 | ENST00000491593 | 704 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | RPL23AP73-201 | ENST00000492507 | 471 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | HMGB1P3-201 | ENST00000502802 | 616 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC021087.2-201 | ENST00000504656 | 1203 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC004980.4-201 | ENST00000513375 | 203 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | LINC02358-201 | ENST00000514413 | 465 nt | TSL 5 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | LINC01603-201 | ENST00000517343 | 1134 nt | TSL 2 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC008632.1-202 | ENST00000518605 | 452 nt | TSL 3 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | IGHVIII-76-1-201 | ENST00000523776 | 286 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | ARL6IP1P3-201 | ENST00000524544 | 560 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC109635.6-201 | ENST00000525487 | 1113 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | OSBPL9P3-201 | ENST00000534523 | 595 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC078880.1-201 | ENST00000546696 | 553 nt | TSL 4 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | NOP56P3-201 | ENST00000549457 | 385 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL390334.1-201 | ENST00000556395 | 450 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC023908.1-201 | ENST00000559899 | 567 nt | TSL 4 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC005242.1-201 | ENST00000585658 | 438 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | ERVK-28-203 | ENST00000600419 | 457 nt | TSL 1 (best) BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AP000769.2-201 | ENST00000602344 | 396 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC018695.3-201 | ENST00000602617 | 408 nt | TSL 2 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC135178.6-201 | ENST00000605314 | 398 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC026790.2-201 | ENST00000606282 | 430 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL163051.2-201 | ENST00000618976 | 735 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC017002.4-201 | ENST00000604721 | 1525 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | PANDAR-201 | ENST00000629595 | 1506 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC114774.1-201 | ENST00000507410 | 1770 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | FAM170B-AS1-203 | ENST00000442525 | 2000 nt | TSL 2 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | IGSF10-201 | ENST00000282466 | 11067 nt | APPRIS P1 TSL 1 (best) BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | C2CD6-202 | ENST00000439140 | 5512 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | USP8-201 | ENST00000307179 | 4243 nt | APPRIS P1 TSL 1 (best) BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | CFAP70-201 | ENST00000310715 | 3703 nt | APPRIS P1 TSL 5 BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AP001029.2-203 | ENST00000589795 | 4910 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | RBPJP2-201 | ENST00000618187 | 1444 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC004076.2-201 | ENST00000620532 | 3323 nt | BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | VNN2-201 | ENST00000326499 | 2118 nt | APPRIS P4 TSL 1 (best) BASIC | 5.56 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | CKAP5-210 | ENST00000529230 | 7121 nt | APPRIS P1 TSL 5 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | DGKH-210 | ENST00000628433 | 3449 nt | TSL 2 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | THAP12P4-201 | ENST00000528321 | 2266 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | LINC00598-206 | ENST00000615947 | 3541 nt | TSL 4 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | MTUS1-202 | ENST00000297488 | 3731 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | ZNF567-203 | ENST00000585696 | 3734 nt | TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | MRRF-208 | ENST00000394315 | 1501 nt | TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL359538.1-201 | ENST00000453498 | 1710 nt | TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | TSPAN8-201 | ENST00000247829 | 1227 nt | APPRIS P1 TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | OR51A2-201 | ENST00000380371 | 942 nt | APPRIS P1 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | SNORD56.6-201 | ENST00000384569 | 71 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | SNORD65-201 | ENST00000391079 | 73 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | RPL10P10-201 | ENST00000403509 | 664 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | RANP4-201 | ENST00000413361 | 655 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC073333.1-201 | ENST00000418907 | 648 nt | TSL 3 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | FABP7P2-201 | ENST00000429946 | 379 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | KCNIP1-205 | ENST00000434108 | 726 nt | TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL353681.1-201 | ENST00000435828 | 731 nt | TSL 3 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | LINC02210-201 | ENST00000444561 | 288 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL627224.1-201 | ENST00000448334 | 444 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | KCNMB2-AS1-205 | ENST00000451742 | 844 nt | TSL 4 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC092647.2-201 | ENST00000452998 | 253 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | EIF2S2P5-201 | ENST00000457635 | 968 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC097484.1-201 | ENST00000471148 | 389 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | SOX2-OT-216 | ENST00000497122 | 578 nt | TSL 4 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | RPL37-204 | ENST00000508493 | 553 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | LINC02236-201 | ENST00000508881 | 552 nt | TSL 4 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC115622.1-201 | ENST00000509628 | 587 nt | TSL 3 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC103833.1-201 | ENST00000517442 | 172 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | IGHVII-44-2-201 | ENST00000517728 | 250 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC012400.1-201 | ENST00000518452 | 381 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC084824.2-201 | ENST00000548906 | 345 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL355922.5-201 | ENST00000553534 | 351 nt | TSL 3 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC131532.1-201 | ENST00000555596 | 519 nt | TSL 4 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | MIR3934-201 | ENST00000579806 | 107 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC090125.1-201 | ENST00000581541 | 493 nt | TSL 3 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | FAM106CP-201 | ENST00000582212 | 507 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | MIR4480-201 | ENST00000582492 | 71 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC008894.1-201 | ENST00000587693 | 367 nt | TSL 5 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AL096803.3-201 | ENST00000609032 | 532 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | BANCR-201 | ENST00000624238 | 473 nt | TSL 2 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC084816.1-212 | ENST00000625240 | 1114 nt | TSL 5 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | GTDC1-220 | ENST00000618778 | 2317 nt | TSL 5 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | ABI2-204 | ENST00000295851 | 22209 nt | TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC092747.4-201 | ENST00000620519 | 1861 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | PPP1R9A-206 | ENST00000433360 | 5369 nt | TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | TET1-201 | ENST00000373644 | 9288 nt | APPRIS P1 TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC104964.3-201 | ENST00000606115 | 2860 nt | BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | RGS17-202 | ENST00000367225 | 7773 nt | APPRIS P1 TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | ORC4-215 | ENST00000536575 | 6328 nt | TSL 2 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | GAPT-202 | ENST00000396776 | 3016 nt | APPRIS P1 TSL 2 BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | LMO3-209 | ENST00000447609 | 3365 nt | APPRIS P1 TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | WDR17-201 | ENST00000280190 | 4705 nt | APPRIS P3 TSL 1 (best) BASIC | 5.55 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | AC103740.1-201 | ENST00000558888 | 7427 nt | TSL 2 BASIC | 5.54 | □□□□□ -1.52 | | |
| PTPN2 | P17706 | DCTN4-201 | ENST00000424236 | 4054 nt | TSL 2 BASIC | 5.54 | □□□□□ -1.52 | | |