Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-2O95096 MIR122-201ENST00000385044 85 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NKX2-2O95096 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.96□□□□□ -1.62
NKX2-2O95096 VTA1P1-201ENST00000414044 866 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 TCEA1P4-201ENST00000415066 844 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC241520.1-201ENST00000422654 1099 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 RPL19P16-201ENST00000433839 588 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC022431.1-201ENST00000450941 438 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-2O95096 CBX1P2-201ENST00000453841 458 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 RPL7P45-201ENST00000455851 743 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 SETP20-201ENST00000457046 852 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 RPL7AP52-201ENST00000458096 790 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AC079168.1-201ENST00000458741 345 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AC110749.1-201ENST00000462007 357 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC058823.1-201ENST00000485315 474 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 RN7SL423P-201ENST00000486202 304 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-2O95096 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.96□□□□□ -1.62
NKX2-2O95096 YWHABP2-201ENST00000540201 713 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-2O95096 YWHAZP1-201ENST00000556286 722 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC023825.1-201ENST00000566704 1030 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.96□□□□□ -1.62
NKX2-2O95096 RN7SL290P-201ENST00000578661 300 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AC022884.3-201ENST00000579571 248 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 SNORD95-201ENST00000579879 68 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NKX2-2O95096 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NKX2-2O95096 MIR4310-201ENST00000582950 57 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC011492.1-201ENST00000600023 315 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 AC112503.1-201ENST00000608436 391 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AC016597.2-201ENST00000613256 341 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 FRG1HP-204ENST00000617940 757 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 AC022960.3-201ENST00000619794 441 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-2O95096 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-2O95096 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-2O95096 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-2O95096 NLRP3P1-201ENST00000622303 1785 ntBASIC4.96□□□□□ -1.62
NKX2-2O95096 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-2O95096 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.96□□□□□ -1.62
NKX2-2O95096 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
NKX2-2O95096 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NKX2-2O95096 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-2O95096 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NKX2-2O95096 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 AL592429.1-201ENST00000403909 1473 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.95□□□□□ -1.62
NKX2-2O95096 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NKX2-2O95096 OR9G4-201ENST00000302957 984 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 RN7SKP81-201ENST00000365603 331 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.95□□□□□ -1.62
NKX2-2O95096 OR1L6-202ENST00000373684 1044 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 MIR143-201ENST00000385300 106 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC013404.1-201ENST00000413068 249 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC079809.1-201ENST00000415468 276 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AL096803.2-201ENST00000450032 677 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 TVP23BP2-201ENST00000455082 615 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-2O95096 RN7SL547P-201ENST00000490793 290 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AC022133.1-201ENST00000490961 571 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 RN7SL447P-201ENST00000494711 245 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 RPL15P21-201ENST00000495592 567 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC098976.1-201ENST00000513014 541 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.95□□□□□ -1.62
NKX2-2O95096 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.95□□□□□ -1.62
NKX2-2O95096 IGKV2D-10-201ENST00000520194 281 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AC092709.1-201ENST00000521355 1045 ntBASIC4.95□□□□□ -1.62
NKX2-2O95096 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.95□□□□□ -1.62
NKX2-2O95096 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms