Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1BO75841 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1BO75841 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1BO75841 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1BO75841 HSPE1P22-201ENST00000456856 327 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 UBTFL6-201ENST00000477929 1024 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AL133372.1-201ENST00000493565 745 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1BO75841 SNORD116-30-201ENST00000516468 85 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 SNORA43.3-201ENST00000517240 103 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1BO75841 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 AC084759.1-201ENST00000561168 290 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1BO75841 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1BO75841 FAM106CP-201ENST00000582212 507 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1BO75841 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1BO75841 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.13□□□□□ -1.75
UPK1BO75841 AC124856.1-201ENST00000600819 896 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AC008536.1-201ENST00000602872 669 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AL137246.1-201ENST00000607072 977 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1BO75841 AL138721.1-201ENST00000616756 179 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 AC103858.2-201ENST00000621471 543 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1BO75841 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
UPK1BO75841 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 CASC19-281ENST00000642118 1554 ntBASIC4.13□□□□□ -1.75
UPK1BO75841 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1BO75841 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1BO75841 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1BO75841 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
UPK1BO75841 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.13□□□□□ -1.75
UPK1BO75841 MAPK10-304ENST00000641341 3984 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1BO75841 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 RLIMP2-201ENST00000427891 1563 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AL080312.1-201ENST00000256654 824 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 RNA5SP151-201ENST00000365632 117 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1BO75841 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC013470.3-201ENST00000420252 1194 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 RPL21P43-201ENST00000425440 472 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1BO75841 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1BO75841 AL138787.1-202ENST00000437804 898 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 ELOCP8-201ENST00000439309 332 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 ELOCP15-201ENST00000442090 332 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1BO75841 AL133477.1-201ENST00000457472 514 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC009963.3-201ENST00000458090 486 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1BO75841 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.12□□□□□ -1.75
UPK1BO75841 IGLVIV-53-201ENST00000520107 367 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC131935.1-201ENST00000524621 333 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1BO75841 OR10G5P-201ENST00000532733 358 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1BO75841 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1BO75841 AL049829.3-202ENST00000604278 711 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 WBP1LP12-201ENST00000604449 331 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC000068.2-201ENST00000608816 460 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC131238.1-201ENST00000617135 328 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1BO75841 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 AC233309.1-201ENST00000619522 751 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 AC243960.7-201ENST00000623532 707 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1BO75841 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.12□□□□□ -1.75
UPK1BO75841 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1BO75841 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1BO75841 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 AC018555.1-201ENST00000567548 1980 ntBASIC4.12□□□□□ -1.75
UPK1BO75841 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
UPK1BO75841 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1BO75841 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms