Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PHGDHO43175 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 AL121886.1-201ENST00000358609 435 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 RNA5SP273-201ENST00000362484 113 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 MIR1303-201ENST00000408625 86 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 RNA5SP431-201ENST00000410312 120 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
PHGDHO43175 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC010099.3-201ENST00000423896 409 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 RAC1P8-201ENST00000427086 527 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 BX323845.3-201ENST00000428215 527 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.63□□□□□ -1.51
PHGDHO43175 NANOGP2-201ENST00000435391 727 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 NDUFS5P5-201ENST00000437256 321 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AP000936.3-201ENST00000438127 255 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 RPS26P30-201ENST00000443431 335 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC023271.1-201ENST00000445936 1090 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AL929288.2-201ENST00000446368 407 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 DNAJC19P8-201ENST00000452887 259 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.63□□□□□ -1.51
PHGDHO43175 RN7SL197P-201ENST00000466981 299 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 RN7SKP183-201ENST00000517169 324 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.63□□□□□ -1.51
PHGDHO43175 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.63□□□□□ -1.51
PHGDHO43175 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 AGGF1P7-201ENST00000562369 913 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.63□□□□□ -1.51
PHGDHO43175 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 FAM27E4-201ENST00000605259 342 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 AL583856.2-201ENST00000606298 543 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 AC231759.1-201ENST00000616455 597 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 AP001052.1-201ENST00000626421 99 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 MTND2P41-201ENST00000637599 773 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 DDX18P4-201ENST00000511690 1966 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.63□□□□□ -1.51
PHGDHO43175 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHGDHO43175 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.63□□□□□ -1.51
PHGDHO43175 NSRP1P1-201ENST00000444067 1693 ntBASIC5.63□□□□□ -1.51
PHGDHO43175 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 AC007938.2-201ENST00000604666 2634 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 ABCC13-202ENST00000463099 3842 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PHGDHO43175 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 AL159987.1-201ENST00000347911 293 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 RN7SKP145-201ENST00000363291 303 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 RN7SKP81-201ENST00000365603 331 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 SNORA70.6-201ENST00000383934 134 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 PEX12P1-201ENST00000400284 1048 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 TMEM183AP1-205ENST00000432739 290 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.62□□□□□ -1.51
PHGDHO43175 AC007679.3-201ENST00000434035 414 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC234064.1-201ENST00000436312 247 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 MTATP6P26-201ENST00000445926 662 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 OTX2P1-201ENST00000450956 354 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 NPM1P13-201ENST00000452663 865 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 AC118758.1-202ENST00000454719 225 ntBASIC5.62□□□□□ -1.51
PHGDHO43175 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHGDHO43175 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.62□□□□□ -1.51
PHGDHO43175 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.62□□□□□ -1.51
PHGDHO43175 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.62□□□□□ -1.51
PHGDHO43175 AC093534.1-201ENST00000504977 132 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms