Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH17O14917 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH17O14917 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH17O14917 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH17O14917 AL513327.3-201ENST00000602618 469 ntBASIC5.44□□□□□ -1.54
PCDH17O14917 AL451049.1-201ENST00000608672 497 ntBASIC5.44□□□□□ -1.54
PCDH17O14917 PART1_2.1-201ENST00000612397 250 ntBASIC5.44□□□□□ -1.54
PCDH17O14917 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH17O14917 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH17O14917 AC079776.5-201ENST00000641920 211 ntBASIC5.44□□□□□ -1.54
PCDH17O14917 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH17O14917 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDH17O14917 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PCDH17O14917 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH17O14917 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH17O14917 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 AL603750.1-201ENST00000624216 1717 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
PCDH17O14917 AL133268.1-201ENST00000405676 1401 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AL158152.1-201ENST00000602652 1435 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 ZNF29P-201ENST00000225587 168 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDH17O14917 RNU6-249P-201ENST00000363016 102 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDH17O14917 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDH17O14917 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 OR3A2-201ENST00000408891 1076 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 TCEA1P4-201ENST00000415066 844 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH17O14917 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDH17O14917 AC113412.1-201ENST00000425840 504 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AC127526.2-201ENST00000426436 775 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDH17O14917 BX276092.6-201ENST00000430476 250 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 FTH1P16-201ENST00000435241 552 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 ELOCP11-201ENST00000436690 332 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 RPL7P29-201ENST00000437151 728 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH17O14917 AC002504.1-201ENST00000438281 691 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 RPS12P17-201ENST00000438591 377 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 ELOCP16-201ENST00000444494 332 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH17O14917 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 BX276092.8-201ENST00000455722 250 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH17O14917 AC093720.1-201ENST00000505681 714 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 RNU6-615P-201ENST00000516065 106 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 RN7SKP265-201ENST00000516448 223 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDH17O14917 HMGB1P42-201ENST00000532126 553 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 AP002373.2-201ENST00000541631 1060 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH17O14917 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH17O14917 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH17O14917 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDH17O14917 OR7E18P-201ENST00000592589 702 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 AP001160.4-201ENST00000596971 382 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AL589674.2-201ENST00000604304 337 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 AC090525.3-201ENST00000605601 189 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH17O14917 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 STMN1P1-201ENST00000617809 440 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDH17O14917 AC104985.3-201ENST00000623479 597 ntBASIC5.43□□□□□ -1.54
PCDH17O14917 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDH17O14917 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDH17O14917 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH17O14917 TCP11X1-202ENST00000622971 1372 ntBASIC5.42□□□□□ -1.54
PCDH17O14917 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH17O14917 BCORP1-203ENST00000513194 5093 ntBASIC5.42□□□□□ -1.54
PCDH17O14917 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PCDH17O14917 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH17O14917 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH17O14917 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH17O14917 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH17O14917 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH17O14917 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms