Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC28A1O00337 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC28A1O00337 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC28A1O00337 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 AL022393.1-201ENST00000625142 1677 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 MIR143-201ENST00000385300 106 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 RNA5SP296-201ENST00000410523 111 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 AC104843.2-201ENST00000427666 297 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AP000936.3-201ENST00000438127 255 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AL450023.3-201ENST00000440592 271 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 SPRYD7P1-201ENST00000443861 570 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC28A1O00337 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC28A1O00337 AC021205.1-201ENST00000468797 348 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC28A1O00337 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC28A1O00337 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC28A1O00337 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC28A1O00337 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 AC108157.1-201ENST00000510511 539 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 MTCYBP19-201ENST00000517463 1124 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AC027308.1-201ENST00000517993 110 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC28A1O00337 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 AC020978.7-201ENST00000575953 1187 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 RN7SL435P-201ENST00000584418 282 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AC068020.1-201ENST00000594215 661 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AC130352.1-201ENST00000602979 661 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AC012467.1-201ENST00000607740 256 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 AC239803.2-201ENST00000610161 430 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC28A1O00337 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 OR5AC4P-202ENST00000642086 985 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC28A1O00337 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC28A1O00337 KARSP1-201ENST00000451871 1752 ntBASIC4.86□□□□□ -1.63
SLC28A1O00337 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC28A1O00337 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC107068.1-201ENST00000563286 4218 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC28A1O00337 STX3-208ENST00000641815 3236 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC28A1O00337 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 RNA5SP183-201ENST00000362452 119 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 RNA5SP132-201ENST00000364725 118 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 SNORA27.3-201ENST00000364937 134 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AL078599.1-201ENST00000402075 293 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AL034374.1-201ENST00000406329 351 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AL513325.1-201ENST00000417716 1034 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 RPA2P2-201ENST00000419698 796 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC28A1O00337 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC090543.1-201ENST00000492168 485 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AC108693.1-201ENST00000496068 432 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AC021087.2-201ENST00000504656 1203 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 BX510359.5-201ENST00000515651 304 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC28A1O00337 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC28A1O00337 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC28A1O00337 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC28A1O00337 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 SNORD95-201ENST00000579879 68 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC095055.1-201ENST00000603472 1113 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AC079395.2-201ENST00000610982 737 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AC004477.3-201ENST00000614061 590 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 RPL23AP61-201ENST00000623642 466 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC28A1O00337 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC28A1O00337 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC068446.1-201ENST00000556425 1549 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms