Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MYO5BP2-201ENST00000449815 1277 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 OTX2P1-201ENST00000450956 354 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AC022795.1-201ENST00000473808 480 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AC116562.1-201ENST00000485355 781 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 OR11I1P-201ENST00000486033 954 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 RPS4XP14-201ENST00000493072 781 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 RPS4XP18-201ENST00000495480 763 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 TCP11X3P-202ENST00000514289 1254 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.56□□□□□ -1.68
UPK1AO00322 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.56□□□□□ -1.68
UPK1AO00322 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 HMGN2P6-201ENST00000551091 273 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.56□□□□□ -1.68
UPK1AO00322 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.56□□□□□ -1.68
UPK1AO00322 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.56□□□□□ -1.68
UPK1AO00322 AC087763.1-201ENST00000603391 286 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AC010424.2-201ENST00000607594 443 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AC016769.4-201ENST00000616893 535 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AL022401.1-201ENST00000619498 108 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AL596275.2-204ENST00000641628 552 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 AL596275.2-206ENST00000641957 626 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
UPK1AO00322 AC021242.1-201ENST00000507315 2035 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
UPK1AO00322 AC099654.2-201ENST00000433031 1980 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 AL022322.2-201ENST00000624072 20397 ntBASIC4.56□□□□□ -1.68
UPK1AO00322 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
UPK1AO00322 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1AO00322 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UPK1AO00322 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 AL513548.1-201ENST00000562904 1724 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UPK1AO00322 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UPK1AO00322 RN7SKP95-201ENST00000362860 303 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1AO00322 AC093414.1-201ENST00000434712 514 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.55□□□□□ -1.68
UPK1AO00322 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1AO00322 AC004938.1-201ENST00000438468 308 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 ARL4AP3-201ENST00000441452 574 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.55□□□□□ -1.68
UPK1AO00322 AC005008.1-201ENST00000456151 612 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 RPL23AP56-201ENST00000460778 453 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AC074386.1-201ENST00000476560 767 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
UPK1AO00322 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.55□□□□□ -1.68
UPK1AO00322 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AC112184.1-201ENST00000505179 312 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AC138409.2-202ENST00000507274 458 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 RFPL4AP5-201ENST00000514977 504 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 SCARNA21.2-201ENST00000516600 166 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.55□□□□□ -1.68
UPK1AO00322 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.55□□□□□ -1.68
UPK1AO00322 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1AO00322 AL049839.1-201ENST00000556151 657 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 OR7E18P-201ENST00000592589 702 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AP001521.2-201ENST00000608772 546 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AC112694.2-201ENST00000623697 768 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 AC006453.5-201ENST00000636451 619 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 TMEM30CP-203ENST00000637814 1035 ntBASIC4.55□□□□□ -1.68
UPK1AO00322 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
UPK1AO00322 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
UPK1AO00322 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
UPK1AO00322 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.55□□□□□ -1.68
UPK1AO00322 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UPK1AO00322 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 RNU4-44P-201ENST00000363050 141 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 RNU6-673P-201ENST00000365084 104 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
UPK1AO00322 MIR323B-201ENST00000385269 82 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 ARL4AP5-201ENST00000404372 599 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1AO00322 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 CHEK2P3-201ENST00000416118 248 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC004448.2-201ENST00000422360 586 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.54□□□□□ -1.68
UPK1AO00322 AL627308.1-201ENST00000435693 821 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1AO00322 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms