Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 RN7SL652P-201ENST00000577769 300 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC073091.2-201ENST00000603205 907 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 Z98755.1-201ENST00000407015 1384 ntBASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SMIM28A0A1B0GU29 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 SOCS5P3-201ENST00000425115 1576 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC025574.1-201ENST00000554784 1653 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AL591848.1-201ENST00000413092 322 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC104333.2-201ENST00000422630 192 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC097523.2-201ENST00000435551 652 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC013410.1-201ENST00000436223 1232 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 VN1R96P-201ENST00000446052 858 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 TPT1P13-201ENST00000449760 499 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC079168.2-201ENST00000453977 416 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC093720.1-201ENST00000505681 714 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 GOLGA5P1-201ENST00000507317 980 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 RNA5SP230-201ENST00000517039 122 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC022616.2-201ENST00000523185 300 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 HIGD1AP5-201ENST00000529959 259 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 Z95327.3-201ENST00000610385 572 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC132825.8-201ENST00000640783 297 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC073869.10-201ENST00000642016 354 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 AC011755.1-201ENST00000623763 2049 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMIM28A0A1B0GU29 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 OR51B3P-201ENST00000412287 913 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC140479.3-201ENST00000418944 1126 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 GLUD1P9-201ENST00000420997 1173 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 RGS17P1-201ENST00000423358 553 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC093890.1-201ENST00000502554 540 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 FKBP1BP1-201ENST00000553366 325 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC105129.1-201ENST00000560250 297 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC115989.2-201ENST00000578640 563 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 MIR4433B-201ENST00000581329 102 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC068790.4-201ENST00000602474 263 ntBASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SMIM28A0A1B0GU29 AC010435.1-201ENST00000623353 1177 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms