Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 RPS12P17-201ENST00000438591 377 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC112492.1-201ENST00000449607 712 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 SBDSP1-204ENST00000453858 737 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 CDC42P1-201ENST00000456658 548 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC099521.1-201ENST00000482557 334 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC111193.1-201ENST00000504097 155 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 SNORA70.20-201ENST00000516848 126 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 IGKV2-18-201ENST00000522607 343 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC007834.2-201ENST00000536310 343 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ZNF321P-202ENST00000550843 495 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC021749.1-201ENST00000604322 607 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC104695.2-201ENST00000605056 775 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 VN1R74P-201ENST00000613259 503 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 STMN1P1-201ENST00000617809 440 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AC024595.1-201ENST00000623088 387 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AP001153.1-201ENST00000641024 338 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02211-204ENST00000642024 1070 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ZNF876P-202ENST00000398732 1485 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 GTF2H2B-203ENST00000508065 1432 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 AL158152.1-201ENST00000602652 1435 ntBASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB1Q9Y5F3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 KYNUP3-201ENST00000574386 1341 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC053481.2-202ENST00000582394 1500 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 ENSAP3-201ENST00000312710 333 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU1-87P-201ENST00000363727 170 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 SNORA58B-201ENST00000364259 136 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-1320P-201ENST00000390838 107 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-1242P-201ENST00000391052 103 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-1269P-201ENST00000391139 107 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 MIR937-201ENST00000401271 86 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AL356320.2-201ENST00000417263 507 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 Z75741.2-201ENST00000417272 1167 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AL590399.2-201ENST00000427536 309 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 CRIP1P1-201ENST00000427567 185 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC023141.8-201ENST00000442554 208 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 FRG2FP-204ENST00000453982 852 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-599P-201ENST00000459383 107 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RNU6-1193P-201ENST00000459461 107 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC128716.1-201ENST00000475129 166 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 RPL23AP37-201ENST00000479658 549 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 HPRT1P2-201ENST00000505250 544 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 IGLV2-28-201ENST00000520681 304 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC027026.1-201ENST00000532323 742 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC009094.1-201ENST00000564443 426 ntBASIC5.81□□□□□ -1.48
PCDHB1Q9Y5F3 AC008088.1-201ENST00000580993 280 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms