Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 RNU6-650P-201ENST00000365658 111 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 RNA5SP284-201ENST00000384547 118 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 HMGB3P7-201ENST00000400214 611 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 MTATP6P31-201ENST00000406985 692 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 IPPKP1-201ENST00000422501 768 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 SRSF1P1-201ENST00000424058 520 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 FMO7P-201ENST00000436045 768 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC019185.1-201ENST00000442718 389 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AL591363.1-201ENST00000450091 483 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC058823.1-201ENST00000485315 474 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 RN7SL423P-201ENST00000486202 304 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC011411.1-201ENST00000509592 876 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 CYCSP22-201ENST00000517555 339 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC018442.3-201ENST00000523025 183 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC093510.2-201ENST00000562820 896 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 CD24P2-201ENST00000565486 219 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 SNORD39.2-201ENST00000579995 76 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC091057.3-201ENST00000602684 733 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC005252.1-201ENST00000604518 1063 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC009597.2-201ENST00000604659 592 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AL645927.2-201ENST00000618350 349 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AL445984.1-201ENST00000637834 659 ntBASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MRPS28Q9Y2Q9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 CASC19-248ENST00000641674 1356 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC005294.1-201ENST00000355509 281 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 RNA5SP435-201ENST00000364044 108 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC211486.3-201ENST00000412694 621 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 RANP4-201ENST00000413361 655 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 OR13Z1P-201ENST00000416141 834 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 OR6C64P-201ENST00000419708 825 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 RPL34P3-201ENST00000421454 338 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 GAPDHP25-201ENST00000447061 1001 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC105399.1-202ENST00000447303 205 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 RN7SL189P-201ENST00000468631 289 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 MTCO1P31-201ENST00000506355 492 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC118282.1-201ENST00000506408 765 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 MTCO3P27-201ENST00000514397 196 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AL671862.1-201ENST00000515851 349 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 RN7SL708P-201ENST00000580952 299 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC008521.2-201ENST00000591021 259 ntBASIC4.53□□□□□ -1.68
MRPS28Q9Y2Q9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms