Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AP000866.6-201ENST00000638898 3579 ntBASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
PDZRN3Q9UPQ7 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC011592.1-201ENST00000624647 3634 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 TEX21P-201ENST00000447107 1476 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AL157777.2-201ENST00000258070 137 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 RNA5SP321-201ENST00000362722 111 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 MIR1284-201ENST00000408337 120 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 TPT1P2-201ENST00000413105 503 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 GAPDHP57-201ENST00000424400 585 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 CECR9-201ENST00000453421 199 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC068522.1-201ENST00000482895 345 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 NCOR1P1-202ENST00000486162 291 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 KLRA1P-201ENST00000503499 986 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 WBP1LP4-201ENST00000505043 344 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC090071.1-201ENST00000507713 644 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC009646.1-201ENST00000510455 318 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 UGT2A3P7-201ENST00000510485 734 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 IGHV7-34-1-201ENST00000519200 350 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 SNRPCP6-201ENST00000528310 210 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AP004609.2-201ENST00000532177 190 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC092375.1-201ENST00000550410 637 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC078814.3-201ENST00000553036 491 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AP001506.1-201ENST00000615444 211 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AC124864.2-201ENST00000624736 186 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 AL022578.1-201ENST00000439330 1433 ntBASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PDZRN3Q9UPQ7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 ZNF806-201ENST00000438300 1774 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 BRD7P1-201ENST00000557705 1915 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 MIR421-201ENST00000365696 85 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 Y_RNA.465-201ENST00000384293 102 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 RNU6-1105P-201ENST00000384774 107 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 OR4K12P-201ENST00000406538 961 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL513185.2-201ENST00000425543 193 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 HMGN1P2-201ENST00000445197 310 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 HMGB1P48-201ENST00000446155 598 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC018638.3-201ENST00000461273 132 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC130509.1-201ENST00000464158 433 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AP002884.1-201ENST00000479691 655 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 AC063943.2-201ENST00000495697 534 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 HNRNPKP5-201ENST00000515300 253 ntBASIC8.53□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SKP40-201ENST00000517211 242 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms