Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC010735.1-201ENST00000567305 1026 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC106734.1-201ENST00000568646 663 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 OR1F2P-201ENST00000570470 933 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 MIR4420-201ENST00000583944 77 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC009027.1-201ENST00000604510 479 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC005252.1-201ENST00000604518 1063 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC013244.3-201ENST00000605614 388 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 OR8G7P-201ENST00000616658 848 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 AL512427.1-201ENST00000618593 349 ntBASIC6.01□□□□□ -1.45
COL20A1Q9P218 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL20A1Q9P218 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL20A1Q9P218 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
COL20A1Q9P218 AL627171.1-201ENST00000618845 1308 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL20A1Q9P218 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL20A1Q9P218 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL20A1Q9P218 AC107021.2-201ENST00000567714 2095 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COL20A1Q9P218 RNU4-4P-201ENST00000364588 130 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 RNU6-481P-201ENST00000384194 107 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL20A1Q9P218 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COL20A1Q9P218 AL589647.1-201ENST00000402485 466 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6□□□□□ -1.45
COL20A1Q9P218 AC096533.1-201ENST00000411645 353 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 RPS4XP16-201ENST00000427198 791 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6□□□□□ -1.45
COL20A1Q9P218 CYCSP42-201ENST00000450823 238 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6□□□□□ -1.45
COL20A1Q9P218 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6□□□□□ -1.45
COL20A1Q9P218 AC020779.1-201ENST00000478757 796 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6□□□□□ -1.45
COL20A1Q9P218 AC021451.1-201ENST00000523498 1129 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC118942.1-201ENST00000529674 1035 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AP000916.1-201ENST00000533869 835 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AP002373.2-201ENST00000541631 1060 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COL20A1Q9P218 MTND1P24-201ENST00000552175 861 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6□□□□□ -1.45
COL20A1Q9P218 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6□□□□□ -1.45
COL20A1Q9P218 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6□□□□□ -1.45
COL20A1Q9P218 AL049838.1-201ENST00000563647 981 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL20A1Q9P218 AP000919.1-202ENST00000581139 1264 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6□□□□□ -1.45
COL20A1Q9P218 AP002802.2-201ENST00000605877 235 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC009163.6-201ENST00000612367 342 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AL669942.2-201ENST00000620352 697 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC015660.5-201ENST00000623238 564 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC099494.2-201ENST00000623371 978 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AP002799.1-201ENST00000623552 423 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6□□□□□ -1.45
COL20A1Q9P218 AC000095.2-202ENST00000637415 154 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC006927.4-201ENST00000639187 543 ntBASIC6□□□□□ -1.45
COL20A1Q9P218 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6□□□□□ -1.45
COL20A1Q9P218 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COL20A1Q9P218 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC053481.2-202ENST00000582394 1500 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 HSPA8P18-201ENST00000439846 1928 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL20A1Q9P218 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 RPS3AP25-201ENST00000411660 793 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 TCEA1P2-201ENST00000420496 906 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 PNRC2P1-201ENST00000423940 420 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 RHOT1P3-201ENST00000436571 331 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 FABP5P3-201ENST00000437960 408 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.99□□□□□ -1.45
COL20A1Q9P218 RPL35AP28-201ENST00000459730 331 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 AC104164.3-201ENST00000467363 1258 ntBASIC5.99□□□□□ -1.45
COL20A1Q9P218 RPL7P40-201ENST00000481703 745 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms