Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.59□□□□□ -1.68
VAPAQ9P0L0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
VAPAQ9P0L0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
VAPAQ9P0L0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
VAPAQ9P0L0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 SNORD96B-201ENST00000386148 79 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 ARL4AP5-201ENST00000404372 599 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 OR3A2-201ENST00000408891 1076 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 VN1R37P-201ENST00000419096 748 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 Z80107.2-201ENST00000445127 392 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 NIP7P2-201ENST00000485801 544 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 RN7SL97P-201ENST00000486780 299 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 RN7SL558P-201ENST00000497468 299 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 BX510359.5-201ENST00000515651 304 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 RN7SKP34-201ENST00000516142 244 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 OR11J2P-201ENST00000555298 907 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AL049839.1-201ENST00000556151 657 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 TVP23CP2-201ENST00000571473 623 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC126915.2-201ENST00000610957 190 ntBASIC4.58□□□□□ -1.68
VAPAQ9P0L0 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.58□□□□□ -1.68
VAPAQ9P0L0 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 SNURFL-201ENST00000309296 343 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RNU6-1320P-201ENST00000390838 107 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RNU6-1269P-201ENST00000391139 107 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 MIR1282-201ENST00000408865 101 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AF186996.5-201ENST00000418098 904 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AL358176.3-201ENST00000420757 454 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 NDUFA5P8-201ENST00000449019 346 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AL389915.2-201ENST00000454576 441 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RNU6-599P-201ENST00000459383 107 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RNU6-1193P-201ENST00000459461 107 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AP002371.1-201ENST00000463604 433 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RPL23AP37-201ENST00000479658 549 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RN7SL244P-201ENST00000493405 297 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RPS4XP18-201ENST00000495480 763 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AL136038.1-201ENST00000497246 351 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RPS27AP18-201ENST00000515536 459 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 FKBP1BP1-201ENST00000553366 325 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC124856.1-201ENST00000600819 896 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 IMMP1LP3-201ENST00000604197 224 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AL008729.2-201ENST00000606393 473 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC010424.2-201ENST00000607594 443 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC096586.2-201ENST00000610260 441 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AC234782.5-201ENST00000617723 324 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 AL158062.1-201ENST00000619632 745 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RNU6-368P-201ENST00000620928 107 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 RNU6-538P-201ENST00000622329 107 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 CUL4AP1-201ENST00000514750 1863 ntBASIC4.57□□□□□ -1.68
VAPAQ9P0L0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VAPAQ9P0L0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.56□□□□□ -1.68
VAPAQ9P0L0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms