Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU4-74P-201ENST00000411280 161 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 DPY19L1P2-201ENST00000426647 915 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 BX323845.1-201ENST00000432417 179 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AL353718.1-201ENST00000451028 517 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 HMGB1P26-201ENST00000452520 628 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AC092647.2-201ENST00000452998 253 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AL389915.2-201ENST00000454576 441 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 RN7SL172P-201ENST00000460535 303 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AC021660.1-201ENST00000465006 554 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 RPL21P6-201ENST00000479171 504 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 SUMO2P14-201ENST00000604488 293 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AC135178.6-201ENST00000605314 398 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 ZNF90P1-201ENST00000480493 1951 ntBASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BLOC1S4Q9NUP1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC093671.1-201ENST00000624981 2929 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 RPL21P67-201ENST00000402896 478 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 RN7SKP229-201ENST00000410465 302 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC105402.1-201ENST00000413336 545 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 VTI1BP4-201ENST00000427516 527 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 MTCO3P21-201ENST00000430791 643 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 RPL10P17-201ENST00000453852 316 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC079841.1-201ENST00000481228 950 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 RN7SL727P-201ENST00000482164 296 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AL049874.2-201ENST00000492636 288 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 MYL12BP2-201ENST00000503948 512 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC108471.1-201ENST00000513977 287 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC020937.1-201ENST00000519677 1013 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 MIR4660-201ENST00000583549 74 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC004775.1-201ENST00000607389 753 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC007342.8-201ENST00000623278 678 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC006484.1-201ENST00000435086 1884 ntBASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BLOC1S4Q9NUP1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 RNA5SP187-201ENST00000384400 119 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 AC092642.1-201ENST00000392417 425 ntBASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
BLOC1S4Q9NUP1 TAF9BP2-201ENST00000400856 499 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms