Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 RPS4XP1-201ENST00000482189 787 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC004815.1-201ENST00000484185 331 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 RPS21P4-201ENST00000487122 248 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 PGAM1P13-201ENST00000507497 754 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC093752.1-206ENST00000511823 336 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 RN7SKP67-201ENST00000515905 235 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VTA1Q9NP79 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC025574.2-201ENST00000615621 514 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
VTA1Q9NP79 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTA1Q9NP79 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC053481.2-202ENST00000582394 1500 ntBASIC6.34□□□□□ -1.39
VTA1Q9NP79 AC007342.5-201ENST00000571340 2142 ntBASIC6.34□□□□□ -1.4
VTA1Q9NP79 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
VTA1Q9NP79 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC007996.1-201ENST00000620414 2821 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 RNU6-666P-201ENST00000363499 107 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 RNU4-68P-201ENST00000364314 141 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 RN7SKP6-201ENST00000364795 319 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 RNU1-77P-201ENST00000390868 162 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC105402.1-201ENST00000413336 545 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 MTCO3P4-201ENST00000419236 787 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 RPS4XP16-201ENST00000427198 791 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 EEF1B2P5-201ENST00000444820 548 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AL050341.1-201ENST00000447743 313 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AL035407.2-201ENST00000454090 378 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC079841.1-201ENST00000481228 950 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC023050.1-201ENST00000498198 304 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 SUMO2P4-201ENST00000504193 276 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC119751.1-201ENST00000513357 765 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 RN7SKP99-201ENST00000517028 307 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 IGLV3-24-201ENST00000517477 197 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC078899.1-201ENST00000521432 1185 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC126177.5-201ENST00000549599 178 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC000068.2-201ENST00000608816 460 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC123767.1-202ENST00000620407 817 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC109454.4-201ENST00000623411 649 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AC017104.5-201ENST00000637647 639 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VTA1Q9NP79 MRRFP1-201ENST00000435941 1675 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VTA1Q9NP79 PWAR1-201ENST00000624188 2414 ntBASIC6.33□□□□□ -1.4
VTA1Q9NP79 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 RNU6-549P-201ENST00000384433 107 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AL390774.1-201ENST00000411924 246 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC002542.1-201ENST00000440683 193 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC093166.2-201ENST00000455969 1017 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 SNRPCP3-201ENST00000474888 476 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC008953.1-201ENST00000497334 318 ntBASIC6.32□□□□□ -1.4
VTA1Q9NP79 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VTA1Q9NP79 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.32□□□□□ -1.4
VTA1Q9NP79 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms