Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
EBF3Q9H4W6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC006484.1-201ENST00000435086 1884 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 THAP12P5-201ENST00000405864 2275 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 RNU4-39P-201ENST00000362455 127 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 HSPA8P15-201ENST00000401676 786 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 NACAP7-201ENST00000407371 609 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 Y_RNA.625-201ENST00000411256 107 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AL139128.1-201ENST00000413921 941 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 RPS26P13-201ENST00000419030 330 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 RIMKLBP2-201ENST00000424737 654 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC073508.1-201ENST00000428866 656 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 RPL12P18-201ENST00000437175 325 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 MTND2P22-201ENST00000444325 1033 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 CLIC4P1-201ENST00000453177 535 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AZGP1P2-201ENST00000454506 345 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC013701.1-201ENST00000522657 465 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 OR7E10P-201ENST00000526420 991 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC135279.1-201ENST00000543493 504 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC092490.3-201ENST00000545370 572 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC093510.2-201ENST00000562820 896 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC010632.3-201ENST00000611377 369 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC100827.5-201ENST00000615883 426 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC241377.1-201ENST00000619797 406 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AL445528.2-201ENST00000620582 470 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC099654.8-201ENST00000637757 681 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 ADAM5-202ENST00000399789 1942 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 AC005261.6-201ENST00000623072 1387 ntBASIC5.52□□□□□ -1.53
EBF3Q9H4W6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EBF3Q9H4W6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 SNORA63.3-201ENST00000362682 132 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 RNU6-152P-201ENST00000384037 107 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 MTND2P16-201ENST00000419987 799 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 OR10T1P-201ENST00000424327 947 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 MORF4L1P7-201ENST00000426038 703 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 RBMY2QP-201ENST00000429799 1147 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 ELOCP13-201ENST00000443934 329 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 Z77249.1-201ENST00000444622 1175 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 Z80107.2-201ENST00000445127 392 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 HMGN1P5-201ENST00000448591 263 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 Z99714.1-201ENST00000450463 807 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.51□□□□□ -1.53
EBF3Q9H4W6 AC104634.1-201ENST00000452720 462 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 DNAJB5P1-201ENST00000454004 806 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 MTND2P6-201ENST00000455337 1030 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 Z92846.1-201ENST00000456203 268 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 RPS26P24-201ENST00000497656 331 ntBASIC5.51□□□□□ -1.53
EBF3Q9H4W6 RPS17P5-201ENST00000498293 408 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms