Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 NPM1P18-201ENST00000434232 732 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 AL162591.2-201ENST00000449634 317 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 CYCSP34-201ENST00000458172 304 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 AC012409.3-201ENST00000611343 981 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 SMG1P7-201ENST00000565246 2704 ntBASIC7.28□□□□□ -1.24
SCAPERQ9BY12 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SCAPERQ9BY12 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 OR4K17-201ENST00000315543 1032 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 RNU6ATAC5P-201ENST00000388104 126 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC025750.1-201ENST00000399891 379 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 NPM1P37-201ENST00000403105 874 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC004980.3-201ENST00000447046 365 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 EEF1A1P1-201ENST00000447052 739 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 RNU6ATAC28P-201ENST00000459249 118 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 FPGT-203ENST00000467578 601 ntTSL 2 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC091167.1-201ENST00000492017 396 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 PPM1AP1-201ENST00000502740 1135 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC106806.2-201ENST00000509365 500 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 ZYXP1-201ENST00000617638 118 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AC018628.1-201ENST00000624147 3819 ntBASIC7.27□□□□□ -1.24
SCAPERQ9BY12 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SCAPERQ9BY12 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 BMS1P19-201ENST00000433925 393 ntBASIC7.27□□□□□ -1.25
SCAPERQ9BY12 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 GAPDHP14-201ENST00000450472 937 ntBASIC7.27□□□□□ -1.25
SCAPERQ9BY12 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SCAPERQ9BY12 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 AC002525.1-201ENST00000624392 1622 ntBASIC7.26□□□□□ -1.25
SCAPERQ9BY12 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 AL122126.1-201ENST00000546905 1318 ntBASIC7.26□□□□□ -1.25
SCAPERQ9BY12 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 SNORA73.1-201ENST00000363107 205 ntBASIC7.26□□□□□ -1.25
SCAPERQ9BY12 AC140479.3-201ENST00000418944 1126 ntBASIC7.26□□□□□ -1.25
SCAPERQ9BY12 RPSAP51-201ENST00000497462 645 ntBASIC7.26□□□□□ -1.25
SCAPERQ9BY12 MTND4LP2-201ENST00000502312 285 ntBASIC7.26□□□□□ -1.25
SCAPERQ9BY12 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 AC114781.5-201ENST00000615297 108 ntBASIC7.26□□□□□ -1.25
SCAPERQ9BY12 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SCAPERQ9BY12 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AC046176.1-201ENST00000435260 1170 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 MTND2P40-201ENST00000436718 841 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 TDGF1P1-201ENST00000445734 527 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 RNU1-6P-201ENST00000516290 144 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AC026688.1-201ENST00000520639 1168 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AL121932.1-201ENST00000605542 214 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AL035461.2-201ENST00000619201 524 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 AC063976.2-201ENST00000425667 3556 ntBASIC7.25□□□□□ -1.25
SCAPERQ9BY12 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCAPERQ9BY12 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms