Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL360013.1-201ENST00000419031 858 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 SDCBPP2-201ENST00000424643 885 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL645939.3-201ENST00000435408 225 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL353706.1-201ENST00000436728 494 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 RPS26P56-201ENST00000444468 240 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 ARPC3P2-201ENST00000457786 533 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC092757.1-201ENST00000467293 467 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 MTND6P8-201ENST00000503471 522 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC093870.1-201ENST00000506837 213 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 RNA5SP473-201ENST00000516402 125 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 PMS2P3-207ENST00000529061 717 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC137768.1-201ENST00000549998 553 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 LSM6P2-201ENST00000552208 177 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL591767.3-201ENST00000554632 525 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL121579.2-201ENST00000555466 590 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 PCMTD1P2-201ENST00000565017 355 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC006362.1-201ENST00000567392 174 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 SNORA70D-201ENST00000578836 135 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL031775.1-201ENST00000607014 887 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL391497.1-201ENST00000608671 547 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC004241.2-201ENST00000614562 444 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AL591926.1-201ENST00000620542 217 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC009878.1-201ENST00000621819 340 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 AC092192.1-201ENST00000633154 1018 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.32□□□□□ -1.24
TRAIPQ9BWF2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 RNA5SP279-201ENST00000365513 117 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 MRPS6P2-201ENST00000381143 370 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AL078604.1-201ENST00000404609 466 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 PGBD4P8-201ENST00000412993 562 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 IPPKP1-201ENST00000422501 768 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 DLGAP5P1-201ENST00000430307 464 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 CEACAMP9-201ENST00000442990 513 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 CRYGGP-201ENST00000443337 145 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 TIMM8BP2-201ENST00000445940 251 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 RN7SL413P-201ENST00000482700 297 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC093664.1-201ENST00000511779 289 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC016144.1-201ENST00000548175 1087 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC037479.1-201ENST00000558361 625 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC026956.1-201ENST00000558741 396 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 SULT1C2P1-202ENST00000562418 459 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 BNIP3P11-201ENST00000603878 563 ntBASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.31□□□□□ -1.24
TRAIPQ9BWF2 AC091305.2-201ENST00000624049 1576 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms