Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC012409.3-201ENST00000611343 981 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AL391261.4-201ENST00000616012 481 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSMD1Q96PZ7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 RPS27AP11-201ENST00000402798 447 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 BX842559.2-201ENST00000451418 605 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 RN7SKP13-201ENST00000515933 244 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC009093.8-201ENST00000641769 292 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 OR6C71P-202ENST00000641886 1107 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AL590065.1-201ENST00000603371 4774 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 BX679664.2-201ENST00000439282 283 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC006326.1-201ENST00000445465 787 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AL132838.2-201ENST00000492041 314 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 MIR383-201ENST00000362257 73 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 RNU1-82P-201ENST00000390851 165 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 SNORA51-201ENST00000606420 132 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 MIR6867-201ENST00000610636 67 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AL133243.1-201ENST00000614487 366 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AC011815.3-201ENST00000624194 473 ntBASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSMD1Q96PZ7 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC097374.1-203ENST00000400783 485 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 CYCSP43-201ENST00000438233 310 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC146944.2-203ENST00000502493 354 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC139495.1-202ENST00000513164 354 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 TRAV8-5-201ENST00000537369 341 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC053481.4-201ENST00000583164 216 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AL022401.1-201ENST00000619498 108 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 OR56B2P-202ENST00000641377 2453 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AL136231.1-201ENST00000429407 730 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC011998.1-201ENST00000433403 117 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 RN7SL691P-201ENST00000494487 301 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AP000619.3-201ENST00000535634 1127 ntBASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC3.92□□□□□ -1.78
CSMD1Q96PZ7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms