Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC106901.1-201ENST00000425086 698 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 RN7SL443P-201ENST00000464331 290 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 DEFB109F-201ENST00000491870 277 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 PGBD4P4-201ENST00000509673 613 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AC006499.4-201ENST00000510947 694 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 GTF2F2P1-201ENST00000511083 675 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 RNA5SP154-201ENST00000516193 111 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AL512310.9-201ENST00000553311 948 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AL159169.2-201ENST00000610061 1269 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AC234782.5-201ENST00000617723 324 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 RMST_9.1-201ENST00000619945 193 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 AC073593.1-201ENST00000624500 411 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 SMG1P6-201ENST00000532337 2930 ntBASIC3.69□□□□□ -1.82
AP1S3Q96PC3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
AP1S3Q96PC3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 SNORA73.1-201ENST00000363107 205 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 RNU6-984P-201ENST00000363236 109 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 RNA5SP335-201ENST00000363817 110 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 OR4K12P-201ENST00000406538 961 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 TMBIM7P-201ENST00000418074 855 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 NMNAT1P2-201ENST00000435192 860 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AP000936.3-201ENST00000438127 255 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AC002504.1-201ENST00000438281 691 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 MRPL48P1-201ENST00000445390 636 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 RN7SL517P-201ENST00000462240 305 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 RPL23AP2-201ENST00000471227 466 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 RPL9P15-201ENST00000491096 532 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AC025445.1-201ENST00000502728 300 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 HNRNPRP2-201ENST00000528421 743 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 HMGB3P26-201ENST00000560051 582 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 ATP5J2P6-201ENST00000565203 266 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 RPL10P14-201ENST00000565265 298 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AC010547.7-201ENST00000570323 333 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 OR1F2P-201ENST00000570470 933 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 CYCSP40-201ENST00000575927 294 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AC008536.1-201ENST00000602872 669 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AL096712.1-201ENST00000614561 159 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AL669942.2-201ENST00000620352 697 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AC068446.1-201ENST00000556425 1549 ntBASIC3.68□□□□□ -1.82
AP1S3Q96PC3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S3Q96PC3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 U3.3-201ENST00000362986 216 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 CDY8P-201ENST00000428380 1279 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 FAM96AP1-201ENST00000430879 482 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms