Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PSMD10P3-201ENST00000437000 448 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 RRM2P4-201ENST00000441721 562 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC073850.1-201ENST00000449243 255 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC021205.1-201ENST00000468797 348 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC128716.1-201ENST00000475129 166 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC109462.1-201ENST00000491087 368 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 SNRPCP2-201ENST00000504370 475 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 MTND6P2-201ENST00000512226 524 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 RNU6-1004P-201ENST00000516584 111 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 CDH12P4-201ENST00000517835 295 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 CDH12P3-201ENST00000517935 295 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 CDH12P1-201ENST00000518435 295 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC021451.1-201ENST00000523498 1129 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AL390726.5-202ENST00000564800 256 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 OR1F2P-201ENST00000570470 933 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC006116.3-201ENST00000592968 361 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC069307.1-201ENST00000602820 447 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AL583832.1-201ENST00000603227 784 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC018618.2-201ENST00000604770 446 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 TAS2R6P-201ENST00000605022 826 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 HIRAP1-201ENST00000605318 787 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 NANOGP3-201ENST00000605855 286 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC015660.5-201ENST00000623238 564 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC021106.3-201ENST00000623925 531 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AP001784.1-201ENST00000624107 428 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC132825.7-201ENST00000638744 335 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AP002512.4-202ENST00000641599 4530 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB4Q8WW32 AL442128.2-201ENST00000620246 1824 ntBASIC5.51□□□□□ -1.53
HMGB4Q8WW32 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC068870.1-201ENST00000563737 2455 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 Z95114.1-201ENST00000624264 14574 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RNA5SP305-201ENST00000362665 119 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RNU6-532P-201ENST00000384318 107 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RNU6-298P-201ENST00000390888 96 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RPS27AP11-201ENST00000402798 447 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 HMGB1P13-201ENST00000406019 642 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RNU2-22P-201ENST00000411266 212 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC096921.1-201ENST00000411661 375 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC073310.1-201ENST00000423226 1033 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 VN1R54P-201ENST00000435210 1049 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RPS11P7-201ENST00000442125 465 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AL451063.1-201ENST00000450164 1133 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 snoU109.5-201ENST00000516231 132 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 RN7SKP66-201ENST00000516681 231 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 MTND2P32-201ENST00000521584 1038 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AL049539.1-201ENST00000611964 459 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC100827.5-201ENST00000615883 426 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AP002799.1-201ENST00000623552 423 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC011815.3-201ENST00000624194 473 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC024023.1-201ENST00000624530 922 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC008993.2-201ENST00000631744 806 ntBASIC5.5□□□□□ -1.53
HMGB4Q8WW32 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.5□□□□□ -1.53
HMGB4Q8WW32 AC017007.4-201ENST00000503353 1352 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms