Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OR4A46P-201ENST00000527255 933 ntBASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 HNRNPRP2-201ENST00000528421 743 ntBASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AL512310.9-201ENST00000553311 948 ntBASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AC116553.2-201ENST00000564203 463 ntBASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AC090312.1-201ENST00000580637 348 ntBASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AC004241.3-201ENST00000611728 517 ntBASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 AC090971.4-201ENST00000560291 1800 ntBASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLHC1Q8NHS4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 OR52B1P-201ENST00000316506 909 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 SNORA73.1-201ENST00000363107 205 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 RN7SKP162-201ENST00000363605 345 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 RN7SKP160-201ENST00000363804 340 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AL121776.1-201ENST00000429337 372 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 OR52B5P-201ENST00000435337 951 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AL391987.1-201ENST00000441025 200 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AL357520.1-201ENST00000441557 453 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 IGHV5-78-201ENST00000450948 295 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC092647.2-201ENST00000452998 253 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AP002371.1-201ENST00000463604 433 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 RN7SL799P-201ENST00000475891 298 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 RPL7P39-201ENST00000481157 744 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC073073.1-201ENST00000493920 463 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC027308.1-201ENST00000517993 110 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 BNIP3P1-201ENST00000547295 580 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 MTND2P13-201ENST00000577438 1039 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 OR52B5P-202ENST00000641118 1110 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 MAPK10-286ENST00000641208 8747 ntBASIC4.77□□□□□ -1.65
CLHC1Q8NHS4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 SNORA17.1-201ENST00000362945 126 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC092642.1-201ENST00000392417 425 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AL078599.1-201ENST00000402075 293 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 RNU2-50P-201ENST00000410494 143 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 VN2R3P-201ENST00000422626 1412 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AL389925.1-201ENST00000432257 728 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AL645937.3-201ENST00000453647 936 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 RPS17P2-201ENST00000461663 408 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 OR2AO1P-201ENST00000476497 403 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC090686.1-201ENST00000481577 749 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC024558.1-201ENST00000505008 528 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 RNA5SP249-201ENST00000516127 99 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 RNA5SP303-201ENST00000516192 130 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 RPL23AP53-201ENST00000521854 457 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AL049830.4-201ENST00000555149 351 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 EIF1P5-201ENST00000585002 234 ntBASIC4.76□□□□□ -1.65
CLHC1Q8NHS4 AC105254.2-201ENST00000603636 436 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms