Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 AC092724.1-201ENST00000624623 3397 ntBASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
DEPDC4Q8N2C3 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 Y_RNA.46-201ENST00000362695 102 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 RNA5SP427-201ENST00000365323 119 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 OR10T1P-201ENST00000424327 947 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AL592114.2-201ENST00000440142 532 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AL035551.1-201ENST00000446931 348 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 RPL23AP15-201ENST00000450202 459 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC063943.1-201ENST00000465434 453 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 RN7SL740P-201ENST00000467060 344 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 RN7SL201P-201ENST00000482306 296 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC116353.1-201ENST00000489727 316 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 TMEM251P1-201ENST00000503717 318 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 PHBP17-201ENST00000528576 541 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AP003174.3-201ENST00000537926 516 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 UBE2CP4-201ENST00000561405 535 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 PRR13P3-201ENST00000603578 376 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC020910.2-201ENST00000603635 610 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC008966.2-201ENST00000606157 453 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AL137000.1-201ENST00000610528 1244 ntBASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.96□□□□□ -1.3
DEPDC4Q8N2C3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 TRIM51GP-201ENST00000534741 1350 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC010928.1-201ENST00000592477 1447 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 FRG1BP-201ENST00000278882 761 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 FRG1CP-201ENST00000358464 769 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 RN7SKP76-201ENST00000364419 323 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 SNORD81.2-201ENST00000365153 76 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 RPL24P7-201ENST00000399435 453 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 RPS4XP8-201ENST00000402039 771 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AC127391.1-201ENST00000411737 98 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 MTND4LP17-201ENST00000414607 293 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 MTATP6P18-201ENST00000417994 673 ntBASIC6.95□□□□□ -1.3
DEPDC4Q8N2C3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms