Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RPL23AP53-201ENST00000521854 457 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC022616.2-201ENST00000523185 300 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AL049830.4-201ENST00000555149 351 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 OR11J2P-201ENST00000555298 907 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC015660.5-201ENST00000623238 564 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AL672167.1-205ENST00000641112 3080 ntBASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC50Q8IVM0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 SNORA66-201ENST00000384792 133 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 VDAC2P1-201ENST00000399358 958 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 RNU2-22P-201ENST00000411266 212 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 CHEK2P5-201ENST00000423877 246 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC005008.1-201ENST00000456151 612 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 GLRXP2-201ENST00000555594 321 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 CYCSP40-201ENST00000575927 294 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 EIF1P5-201ENST00000585002 234 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC126915.2-201ENST00000610957 190 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AL356752.1-201ENST00000615844 593 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC008115.4-201ENST00000619780 775 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC019206.1-201ENST00000621938 425 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 AC099494.2-201ENST00000623371 978 ntBASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC50Q8IVM0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 MTCO1P15-201ENST00000529569 1526 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AL512422.1-201ENST00000407033 553 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 OR2X1P-201ENST00000421144 687 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 OR52B5P-201ENST00000435337 951 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 BTG3P1-201ENST00000435859 716 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 RPL12P11-201ENST00000439970 501 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 ARAFP2-201ENST00000440565 559 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AC245047.2-201ENST00000441060 530 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 TCEA1P1-201ENST00000449716 880 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 IGHV5-78-201ENST00000450948 295 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AL606490.1-201ENST00000452266 765 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 RPS18P6-201ENST00000476880 458 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AC117394.1-201ENST00000477323 567 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 NIP7P2-201ENST00000485801 544 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 RPS21P4-201ENST00000487122 248 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 RN7SL101P-201ENST00000496350 279 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AC024558.1-201ENST00000505008 528 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 RPL7L1P4-201ENST00000513004 707 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 ENPP7P9-201ENST00000514456 627 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 OR4A46P-201ENST00000527255 933 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 EIF4A2P5-201ENST00000529914 499 ntBASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC50Q8IVM0 AC012146.2-201ENST00000576545 416 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms