Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AL445528.1-201ENST00000426330 420 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AL161722.2-201ENST00000434731 981 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC245517.2-201ENST00000442890 346 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC104634.1-201ENST00000452720 462 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC108161.1-201ENST00000461060 402 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC007998.1-201ENST00000474156 672 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 HMGB1P40-201ENST00000525121 540 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 BLZF2P-201ENST00000553776 1130 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 NPM1P47-201ENST00000560843 856 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 RBM22P1-201ENST00000578589 1214 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC022884.3-201ENST00000579571 248 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 uc_338.9-201ENST00000617424 182 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC020763.5-201ENST00000623298 430 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RAPH1Q70E73 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAPH1Q70E73 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RAPH1Q70E73 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 AL359715.4-201ENST00000606629 1436 ntBASIC5.22□□□□□ -1.57
RAPH1Q70E73 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.22□□□□□ -1.57
RAPH1Q70E73 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RAPH1Q70E73 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RAPH1Q70E73 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
RAPH1Q70E73 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC017079.1-201ENST00000333650 415 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 RNU6-244P-201ENST00000391028 104 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 SDHDP6-201ENST00000414693 480 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 MRPS33P4-201ENST00000434892 317 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 AL390119.1-201ENST00000440329 312 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 BX842559.2-201ENST00000451418 605 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 YWHAEP1-201ENST00000453697 763 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 RNU7-27P-201ENST00000459281 62 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC005912.1-201ENST00000495392 255 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC074087.1-201ENST00000512059 724 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 MIR1273E-201ENST00000581165 102 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC027243.2-201ENST00000602530 724 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 FO393422.1-201ENST00000603908 708 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC016911.1-201ENST00000613297 452 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 PHKBP1-201ENST00000450951 1951 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 OR51C1P-202ENST00000641159 1444 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.21□□□□□ -1.58
RAPH1Q70E73 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAPH1Q70E73 AL731566.1-201ENST00000620490 1937 ntBASIC5.21□□□□□ -1.58
RAPH1Q70E73 AL451142.2-201ENST00000429076 2090 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPH1Q70E73 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPH1Q70E73 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAPH1Q70E73 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.2□□□□□ -1.58
RAPH1Q70E73 OR8V1P-201ENST00000395193 873 ntBASIC5.2□□□□□ -1.58
RAPH1Q70E73 RN7SKP16-201ENST00000410180 299 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms