Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC090181.2-201ENST00000602975 672 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC091868.1-201ENST00000508746 304 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 MIR6867-201ENST00000610636 67 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC005899.7-201ENST00000618199 588 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AL356276.2-201ENST00000435919 558 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 RRM2P4-201ENST00000441721 562 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 RN7SL600P-201ENST00000581811 299 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AP003497.2-201ENST00000624220 967 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VPS13CQ709C8 SMG1P6-201ENST00000532337 2930 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS13CQ709C8 AC092162.3-201ENST00000624511 1624 ntBASIC3.76□□□□□ -1.81
VPS13CQ709C8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 OR1F12-201ENST00000402365 945 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 E2F6P2-201ENST00000420708 748 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 AL359265.1-201ENST00000440296 795 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC092709.1-201ENST00000521355 1045 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC027369.5-201ENST00000533838 755 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC073136.1-201ENST00000449426 2884 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC021146.4-201ENST00000309229 279 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 RNU6-1279P-201ENST00000383917 103 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC022133.1-201ENST00000490961 571 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 HNRNPCP4-201ENST00000571636 900 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC091953.5-201ENST00000622919 233 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS13CQ709C8 RNA5SP130-201ENST00000364431 114 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 SNORA71.2-201ENST00000364941 134 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 BX276092.6-201ENST00000430476 250 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 BX276092.8-201ENST00000455722 250 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC068993.1-201ENST00000546724 589 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 FAM27D1-201ENST00000612308 341 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 AC000095.2-202ENST00000637415 154 ntBASIC3.75□□□□□ -1.81
VPS13CQ709C8 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS13CQ709C8 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms