Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.2□□□□□ -1.74
USF2Q15853 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USF2Q15853 LYPLA1P3-201ENST00000402650 695 ntBASIC4.2□□□□□ -1.74
USF2Q15853 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.2□□□□□ -1.74
USF2Q15853 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 AL133173.1-201ENST00000423458 397 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AL662874.1-201ENST00000426065 230 ntBASIC4.2□□□□□ -1.74
USF2Q15853 FTH1P6-201ENST00000430768 320 ntBASIC4.2□□□□□ -1.74
USF2Q15853 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.2□□□□□ -1.74
USF2Q15853 AL450023.1-201ENST00000450868 751 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC144530.1-201ENST00000452862 555 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC016724.1-201ENST00000453215 421 ntBASIC4.2□□□□□ -1.74
USF2Q15853 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.2□□□□□ -1.74
USF2Q15853 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC112206.1-201ENST00000468416 477 ntBASIC4.2□□□□□ -1.74
USF2Q15853 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
USF2Q15853 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC005912.1-201ENST00000495392 255 ntBASIC4.2□□□□□ -1.74
USF2Q15853 PRELID3BP7-201ENST00000503606 469 ntBASIC4.2□□□□□ -1.74
USF2Q15853 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.2□□□□□ -1.74
USF2Q15853 AC109464.1-201ENST00000511091 819 ntBASIC4.2□□□□□ -1.74
USF2Q15853 EIF3KP3-201ENST00000514461 639 ntBASIC4.2□□□□□ -1.74
USF2Q15853 SNORD116-26-201ENST00000516006 96 ntBASIC4.2□□□□□ -1.74
USF2Q15853 RNA5SP303-201ENST00000516192 130 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.2□□□□□ -1.74
USF2Q15853 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.2□□□□□ -1.74
USF2Q15853 OR5AN2P-201ENST00000534535 896 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC135001.1-201ENST00000544546 283 ntBASIC4.2□□□□□ -1.74
USF2Q15853 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.2□□□□□ -1.74
USF2Q15853 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.2□□□□□ -1.74
USF2Q15853 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 AC108865.2-201ENST00000606881 432 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC015982.1-201ENST00000608113 465 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 AL096803.3-201ENST00000609032 532 ntBASIC4.2□□□□□ -1.74
USF2Q15853 OR6R2P-201ENST00000609216 300 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.2□□□□□ -1.74
USF2Q15853 RMST_5.1-201ENST00000618704 126 ntBASIC4.2□□□□□ -1.74
USF2Q15853 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 MIR193BHG-214ENST00000641765 509 ntBASIC4.2□□□□□ -1.74
USF2Q15853 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
USF2Q15853 YES1P1-201ENST00000418510 1628 ntBASIC4.2□□□□□ -1.74
USF2Q15853 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.2□□□□□ -1.74
USF2Q15853 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USF2Q15853 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.2□□□□□ -1.74
USF2Q15853 SALL4P2-201ENST00000423288 2910 ntBASIC4.19□□□□□ -1.74
USF2Q15853 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USF2Q15853 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
USF2Q15853 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
USF2Q15853 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
USF2Q15853 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.19□□□□□ -1.74
USF2Q15853 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USF2Q15853 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USF2Q15853 RNA5SP435-201ENST00000364044 108 ntBASIC4.19□□□□□ -1.74
USF2Q15853 RN7SKP15-201ENST00000364742 309 ntBASIC4.19□□□□□ -1.74
USF2Q15853 RN7SKP6-201ENST00000364795 319 ntBASIC4.19□□□□□ -1.74
USF2Q15853 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.19□□□□□ -1.74
USF2Q15853 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 GAPDHP42-201ENST00000406848 981 ntBASIC4.19□□□□□ -1.74
USF2Q15853 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
USF2Q15853 HMGN1P20-201ENST00000411849 300 ntBASIC4.19□□□□□ -1.74
USF2Q15853 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 GLUD1P9-201ENST00000420997 1173 ntBASIC4.19□□□□□ -1.74
USF2Q15853 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USF2Q15853 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 AC090018.1-201ENST00000434369 367 ntBASIC4.19□□□□□ -1.74
USF2Q15853 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.19□□□□□ -1.74
USF2Q15853 PA2G4P6-201ENST00000438325 1197 ntBASIC4.19□□□□□ -1.74
USF2Q15853 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 AL450996.1-201ENST00000445574 1202 ntBASIC4.19□□□□□ -1.74
USF2Q15853 LRRC37A14P-201ENST00000452297 462 ntBASIC4.19□□□□□ -1.74
USF2Q15853 AL445665.1-202ENST00000452436 324 ntBASIC4.19□□□□□ -1.74
USF2Q15853 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USF2Q15853 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.19□□□□□ -1.74
USF2Q15853 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.19□□□□□ -1.74
USF2Q15853 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.19□□□□□ -1.74
USF2Q15853 AC005000.1-201ENST00000536192 288 ntBASIC4.19□□□□□ -1.74
USF2Q15853 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.19□□□□□ -1.74
USF2Q15853 AC012616.1-201ENST00000600294 197 ntBASIC4.19□□□□□ -1.74
USF2Q15853 AC244107.2-201ENST00000611773 76 ntBASIC4.19□□□□□ -1.74
USF2Q15853 AC244517.3-201ENST00000616254 1235 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms