Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 RNU6-98P-201ENST00000384173 107 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 GSTM3P2-201ENST00000412746 530 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.8□□□□□ -1.64
SCN1BQ07699 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 BX323845.3-201ENST00000428215 527 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 GAPDHP48-201ENST00000436626 961 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 VN1R110P-201ENST00000438988 971 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AL031584.1-201ENST00000447169 754 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 RPL9P15-201ENST00000491096 532 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 RPS12P31-201ENST00000491419 398 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AL117692.1-201ENST00000494283 713 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 HMGB3P16-201ENST00000508037 287 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC074255.1-201ENST00000511259 501 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 Y_RNA.667-201ENST00000516212 107 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC021678.3-201ENST00000517893 476 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 OSBPL9P3-201ENST00000534523 595 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AL121594.4-201ENST00000556211 1196 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC005520.3-201ENST00000602874 370 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC011374.2-201ENST00000607135 526 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AL355816.1-201ENST00000607951 118 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AL359091.2-201ENST00000609303 556 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AL139407.1-201ENST00000613826 1175 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC037198.3-201ENST00000616754 526 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN1BQ07699 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.8□□□□□ -1.64
SCN1BQ07699 AP001002.1-201ENST00000625148 1513 ntBASIC4.8□□□□□ -1.64
SCN1BQ07699 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN1BQ07699 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN1BQ07699 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN1BQ07699 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN1BQ07699 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SCN1BQ07699 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AC068446.1-201ENST00000556425 1549 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SCN1BQ07699 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 RNA5SP273-201ENST00000362484 113 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.79□□□□□ -1.64
SCN1BQ07699 RNA5SP487-201ENST00000410186 122 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 EIF4A1P3-201ENST00000411521 244 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN1BQ07699 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.79□□□□□ -1.64
SCN1BQ07699 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AC090018.1-201ENST00000434369 367 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 RPL7P29-201ENST00000437151 728 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.79□□□□□ -1.64
SCN1BQ07699 RPS27P5-201ENST00000444247 244 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN1BQ07699 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN1BQ07699 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCN1BQ07699 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.79□□□□□ -1.64
SCN1BQ07699 RN7SKP46-201ENST00000515942 234 ntBASIC4.79□□□□□ -1.64
SCN1BQ07699 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.79□□□□□ -1.64
SCN1BQ07699 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms