Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 U3.3-201ENST00000362986 216 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 RN7SKP113-201ENST00000363891 295 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 RNA5SP242-201ENST00000364171 118 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 U3.32-201ENST00000408116 212 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 CDY17P-201ENST00000414121 1282 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 IPMKP1-201ENST00000425988 855 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 RPL7L1P9-201ENST00000431298 745 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 FGF7P3-201ENST00000454645 303 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 RN7SL441P-201ENST00000492388 296 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC015864.1-201ENST00000496512 544 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AL136038.1-201ENST00000497246 351 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 UGT2A3P7-201ENST00000510485 734 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 BX510359.5-201ENST00000515651 304 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 RNA5SP362-201ENST00000516048 118 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 RNA5SP249-201ENST00000516127 99 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 MIR3614-201ENST00000581261 86 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC007204.2-201ENST00000615022 616 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC026124.2-201ENST00000621847 656 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 BMS1P21-201ENST00000634565 365 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 CASC19-222ENST00000641321 1173 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 OR8A1-204ENST00000642111 1145 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AL133268.1-201ENST00000405676 1401 ntBASIC3.83□□□□□ -1.8
HIST1H1AQ02539 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HIST1H1AQ02539 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 KPNA2P2-201ENST00000419546 1489 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 MTND4P26-201ENST00000415971 1359 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 RN7SKP104-201ENST00000362605 328 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 SNORA2.3-201ENST00000383920 135 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 MIR708-201ENST00000390708 88 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AL590609.2-201ENST00000421430 368 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 RPS26P41-201ENST00000450370 284 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 OR52E7P-201ENST00000452394 933 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AL356981.1-201ENST00000454879 684 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC005008.1-201ENST00000456151 612 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 SETP20-201ENST00000457046 852 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC023141.9-201ENST00000458734 412 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC108751.2-201ENST00000469993 231 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.82□□□□□ -1.8
HIST1H1AQ02539 OR2AO1P-201ENST00000476497 403 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 SIAH1P1-201ENST00000479411 923 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.82□□□□□ -1.8
HIST1H1AQ02539 AC104109.1-201ENST00000498563 436 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms