Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RNA5SP223-201ENST00000365174 120 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 OR1L6-202ENST00000373684 1044 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK3Q00526 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CDK3Q00526 MT-TP-201ENST00000387461 68 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 RNA5SP241-201ENST00000391326 114 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AL645733.1-201ENST00000402250 217 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 RNU2-22P-201ENST00000411266 212 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.09□□□□□ -1.59
CDK3Q00526 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK3Q00526 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK3Q00526 RPS26P13-201ENST00000419030 330 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK3Q00526 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 HMGB3P10-201ENST00000434734 572 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 PSMD10P3-201ENST00000437000 448 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 KNOP1P3-201ENST00000446933 426 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK3Q00526 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 MTND2P6-201ENST00000455337 1030 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.09□□□□□ -1.59
CDK3Q00526 AC020779.1-201ENST00000478757 796 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 RN7SL97P-201ENST00000486780 299 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 AC026782.2-201ENST00000510845 636 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC027338.1-201ENST00000514840 825 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 MTCYBP19-201ENST00000517463 1124 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC092709.1-201ENST00000521355 1045 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK3Q00526 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 AC079148.1-201ENST00000565944 819 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC233266.2-201ENST00000567067 528 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK3Q00526 RN7SL290P-201ENST00000578661 300 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC068020.1-201ENST00000594215 661 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK3Q00526 AC130352.1-201ENST00000602979 661 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC098483.2-201ENST00000603158 454 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC084373.1-201ENST00000603311 235 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC093799.2-201ENST00000610062 578 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK3Q00526 AC097372.4-201ENST00000625025 466 ntBASIC5.09□□□□□ -1.59
CDK3Q00526 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK3Q00526 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK3Q00526 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CDK3Q00526 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
CDK3Q00526 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDK3Q00526 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CDK3Q00526 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDK3Q00526 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK3Q00526 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK3Q00526 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDK3Q00526 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK3Q00526 GPS2P1-201ENST00000411761 986 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AL590806.1-201ENST00000415818 853 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AL121882.1-201ENST00000422893 417 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 HSPD1P12-201ENST00000429127 1069 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 RBMY2QP-201ENST00000429799 1147 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK3Q00526 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK3Q00526 RPL12P3-201ENST00000440080 396 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK3Q00526 HMGN2P25-201ENST00000486956 268 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 SUMO1P1-201ENST00000497904 306 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK3Q00526 AC110775.1-201ENST00000513721 462 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK3Q00526 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.08□□□□□ -1.6
CDK3Q00526 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.08□□□□□ -1.6
CDK3Q00526 MIR4646-201ENST00000580775 63 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AC002069.2-201ENST00000603580 883 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 BNIP3P35-201ENST00000604530 490 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AP005432.2-201ENST00000608162 586 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AC084824.5-201ENST00000612009 413 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 AL645927.2-201ENST00000618350 349 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 RPL23AP61-201ENST00000623642 466 ntBASIC5.08□□□□□ -1.6
CDK3Q00526 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDK3Q00526 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CDK3Q00526 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDK3Q00526 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CDK3Q00526 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK3Q00526 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK3Q00526 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.08□□□□□ -1.6
CDK3Q00526 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDK3Q00526 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms