Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H3AP68431 MIR6729-201ENST00000618194 65 ntBASIC4.3□□□□□ -1.72
HIST1H3AP68431 AF117829.2-201ENST00000619538 361 ntBASIC4.3□□□□□ -1.72
HIST1H3AP68431 AC015871.5-202ENST00000623252 701 ntBASIC4.3□□□□□ -1.72
HIST1H3AP68431 AC243960.7-201ENST00000623532 707 ntBASIC4.3□□□□□ -1.72
HIST1H3AP68431 AL353662.3-201ENST00000625131 237 ntBASIC4.3□□□□□ -1.72
HIST1H3AP68431 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H3AP68431 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H3AP68431 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.3□□□□□ -1.72
HIST1H3AP68431 AC006453.5-201ENST00000636451 619 ntBASIC4.3□□□□□ -1.72
HIST1H3AP68431 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.3□□□□□ -1.72
HIST1H3AP68431 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.3□□□□□ -1.72
HIST1H3AP68431 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HIST1H3AP68431 AC008758.3-201ENST00000507003 1829 ntBASIC4.3□□□□□ -1.72
HIST1H3AP68431 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AL606537.1-201ENST00000607258 2011 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC245100.2-201ENST00000454544 1679 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC008549.2-201ENST00000333482 706 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 MIR765-201ENST00000390226 114 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AL357515.1-201ENST00000402967 542 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 EIF4HP2-201ENST00000424380 563 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 SNRPFP2-201ENST00000440710 251 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AL137845.2-201ENST00000444292 988 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC022795.1-201ENST00000473808 480 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 RPL21P6-201ENST00000479171 504 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC109462.1-201ENST00000491087 368 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC008953.1-201ENST00000497334 318 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC093763.2-201ENST00000505334 1223 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 MRPS33P2-201ENST00000507850 322 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC010424.2-201ENST00000607594 443 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 MIR6826-201ENST00000617808 98 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 CR381572.2-201ENST00000624852 397 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC126323.6-202ENST00000568092 3511 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
HIST1H3AP68431 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HIST1H3AP68431 AC027228.2-201ENST00000567141 2154 ntBASIC4.29□□□□□ -1.72
HIST1H3AP68431 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H3AP68431 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H3AP68431 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H3AP68431 CIR1P2-201ENST00000514821 1342 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 DDX18P5-201ENST00000534547 1306 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H3AP68431 AC120338.1-201ENST00000625074 1541 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 RN7SKP269-201ENST00000365545 319 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 AL021331.1-201ENST00000402817 582 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 AP002530.1-201ENST00000405705 684 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 RN7SKP229-201ENST00000410465 302 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 AC013268.2-201ENST00000420753 337 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 RPL7P11-201ENST00000437586 658 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 RHEBP2-201ENST00000450289 600 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 RBMY2TP-201ENST00000451162 947 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 RN7SL319P-201ENST00000480656 221 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 AC090686.1-201ENST00000481577 749 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 AC020890.1-201ENST00000491837 504 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 RPL37AP8-201ENST00000494116 276 ntBASIC4.28□□□□□ -1.72
HIST1H3AP68431 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H3AP68431 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.28□□□□□ -1.72
HIST1H3AP68431 AC013701.1-201ENST00000522657 465 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms