Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 RPL7AP28-201ENST00000464513 571 ntBASIC4.33□□□□□ -1.72
UBA52P62987 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 AC110775.1-201ENST00000513721 462 ntBASIC4.33□□□□□ -1.72
UBA52P62987 RN7SKP147-201ENST00000517154 244 ntBASIC4.33□□□□□ -1.72
UBA52P62987 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.33□□□□□ -1.72
UBA52P62987 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.33□□□□□ -1.72
UBA52P62987 AC005341.1-201ENST00000571086 708 ntBASIC4.33□□□□□ -1.72
UBA52P62987 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 MIR4480-201ENST00000582492 71 ntBASIC4.33□□□□□ -1.72
UBA52P62987 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.33□□□□□ -1.72
UBA52P62987 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.33□□□□□ -1.72
UBA52P62987 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.33□□□□□ -1.72
UBA52P62987 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.33□□□□□ -1.72
UBA52P62987 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.33□□□□□ -1.72
UBA52P62987 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UBA52P62987 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UBA52P62987 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
UBA52P62987 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.33□□□□□ -1.72
UBA52P62987 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.32□□□□□ -1.72
UBA52P62987 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBA52P62987 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBA52P62987 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 MTHFD2P5-201ENST00000320415 844 ntBASIC4.32□□□□□ -1.72
UBA52P62987 SNORA56-201ENST00000383966 129 ntBASIC4.32□□□□□ -1.72
UBA52P62987 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UBA52P62987 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UBA52P62987 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 AC073648.4-201ENST00000442655 781 ntBASIC4.32□□□□□ -1.72
UBA52P62987 GAPDHP25-201ENST00000447061 1001 ntBASIC4.32□□□□□ -1.72
UBA52P62987 MORF4L1P4-201ENST00000450245 976 ntBASIC4.32□□□□□ -1.72
UBA52P62987 AC005008.1-201ENST00000456151 612 ntBASIC4.32□□□□□ -1.72
UBA52P62987 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 EIF2S2P5-201ENST00000457635 968 ntBASIC4.32□□□□□ -1.72
UBA52P62987 AC090114.3-201ENST00000479267 829 ntBASIC4.32□□□□□ -1.72
UBA52P62987 AC007686.1-201ENST00000488511 463 ntBASIC4.32□□□□□ -1.72
UBA52P62987 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.32□□□□□ -1.72
UBA52P62987 STMN1P2-201ENST00000508435 439 ntBASIC4.32□□□□□ -1.72
UBA52P62987 AC109464.1-201ENST00000511091 819 ntBASIC4.32□□□□□ -1.72
UBA52P62987 PCNPP1-201ENST00000552501 511 ntBASIC4.32□□□□□ -1.72
UBA52P62987 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UBA52P62987 AP005403.1-201ENST00000579720 229 ntBASIC4.32□□□□□ -1.72
UBA52P62987 MIR3934-201ENST00000579806 107 ntBASIC4.32□□□□□ -1.72
UBA52P62987 FAM25E-202ENST00000608562 189 ntBASIC4.32□□□□□ -1.72
UBA52P62987 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 CASC19-204ENST00000641001 2055 ntBASIC4.32□□□□□ -1.72
UBA52P62987 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UBA52P62987 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 AL449283.1-201ENST00000602631 3403 ntBASIC4.32□□□□□ -1.72
UBA52P62987 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBA52P62987 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.32□□□□□ -1.72
UBA52P62987 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.32□□□□□ -1.72
UBA52P62987 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.32□□□□□ -1.72
UBA52P62987 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UBA52P62987 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
UBA52P62987 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBA52P62987 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UBA52P62987 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.32□□□□□ -1.72
UBA52P62987 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
UBA52P62987 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.31□□□□□ -1.72
UBA52P62987 AC104118.1-201ENST00000607625 1589 ntBASIC4.31□□□□□ -1.72
UBA52P62987 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
UBA52P62987 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.31□□□□□ -1.72
UBA52P62987 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UBA52P62987 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBA52P62987 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBA52P62987 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.31□□□□□ -1.72
UBA52P62987 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UBA52P62987 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.31□□□□□ -1.72
UBA52P62987 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBA52P62987 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBA52P62987 DBIP1-201ENST00000401435 260 ntBASIC4.31□□□□□ -1.72
UBA52P62987 RPS24P12-201ENST00000402084 394 ntBASIC4.31□□□□□ -1.72
UBA52P62987 RPL21P108-201ENST00000413857 481 ntBASIC4.31□□□□□ -1.72
UBA52P62987 TMBIM7P-201ENST00000418074 855 ntBASIC4.31□□□□□ -1.72
UBA52P62987 AC004690.1-201ENST00000418216 328 ntBASIC4.31□□□□□ -1.72
UBA52P62987 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.31□□□□□ -1.72
UBA52P62987 RPL12P17-201ENST00000432393 498 ntBASIC4.31□□□□□ -1.72
UBA52P62987 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UBA52P62987 AC093166.2-201ENST00000455969 1017 ntBASIC4.31□□□□□ -1.72
UBA52P62987 RPS29P22-201ENST00000472363 168 ntBASIC4.31□□□□□ -1.72
UBA52P62987 DEFB109F-201ENST00000491870 277 ntBASIC4.31□□□□□ -1.72
UBA52P62987 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.31□□□□□ -1.72
UBA52P62987 RPS4XP20-201ENST00000505751 772 ntBASIC4.31□□□□□ -1.72
UBA52P62987 ENPP7P9-201ENST00000514456 627 ntBASIC4.31□□□□□ -1.72
UBA52P62987 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.31□□□□□ -1.72
UBA52P62987 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
UBA52P62987 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.31□□□□□ -1.72
UBA52P62987 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.31□□□□□ -1.72
UBA52P62987 RPL23AP53-201ENST00000521854 457 ntBASIC4.31□□□□□ -1.72
UBA52P62987 BRD9P1-201ENST00000529855 560 ntBASIC4.31□□□□□ -1.72
UBA52P62987 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
UBA52P62987 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms