Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SEC61A1P61619 SNX6P1-201ENST00000601728 1224 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC073137.1-201ENST00000605636 634 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.85□□□□□ -1.63
SEC61A1P61619 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.85□□□□□ -1.63
SEC61A1P61619 MIR193BHG-214ENST00000641765 509 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SEC61A1P61619 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.85□□□□□ -1.63
SEC61A1P61619 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SEC61A1P61619 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SEC61A1P61619 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SEC61A1P61619 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A1P61619 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 MUC2-202ENST00000613187 4845 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC117409.1-201ENST00000470499 1310 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 RNU5B-4P-201ENST00000363508 111 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 RNA5SP394-201ENST00000364216 119 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 RNU6-468P-201ENST00000384003 109 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 U3.28-201ENST00000391249 210 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 TAF9BP2-201ENST00000400856 499 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 HMGB3P19-201ENST00000403971 560 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 RN7SKP206-201ENST00000410823 293 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 RN7SKP286-201ENST00000410894 299 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AL357752.1-201ENST00000412817 349 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 RNF10P1-201ENST00000418589 369 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AK4P4-201ENST00000419465 646 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC093155.2-201ENST00000420734 937 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 RPL12P28-201ENST00000430852 489 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 NDUFA5P10-201ENST00000432147 357 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 DEFA9P-201ENST00000433042 285 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A1P61619 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 MTCYBP31-201ENST00000438855 1122 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AP000281.1-201ENST00000444036 316 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 LINC02210-201ENST00000444561 288 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC083899.1-201ENST00000454465 3819 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC004129.2-201ENST00000457229 287 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 PSAT1P4-201ENST00000466500 526 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC020779.1-201ENST00000478757 796 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC099521.1-201ENST00000482557 334 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AL049874.2-201ENST00000492636 288 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC082651.2-201ENST00000496833 166 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 SUMO1P1-201ENST00000497904 306 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 MTND4LP2-201ENST00000502312 285 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 NENFP3-201ENST00000503735 313 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 SUMO2P4-201ENST00000504193 276 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC021106.1-201ENST00000509020 1058 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC106872.4-201ENST00000510050 523 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 CYCSP22-201ENST00000517555 339 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AL512310.9-201ENST00000553311 948 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC023824.3-201ENST00000569003 562 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC127024.5-201ENST00000580085 462 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 MIR3936-201ENST00000584304 110 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.84□□□□□ -1.63
SEC61A1P61619 MIR7853-201ENST00000584820 132 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC245036.5-201ENST00000596330 847 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC011445.2-201ENST00000599274 173 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 GAS5-AS1-201ENST00000602767 694 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AL139124.1-201ENST00000609123 421 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC084782.3-201ENST00000612282 578 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AL669942.2-201ENST00000620352 697 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A1P61619 AC092159.4-201ENST00000624944 550 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.84□□□□□ -1.63
SEC61A1P61619 MIR4302-201ENST00000638058 60 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 AC006927.2-201ENST00000639256 389 ntBASIC4.84□□□□□ -1.63
SEC61A1P61619 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms