Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
RHBDL3P58872 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.36□□□□□ -1.39
RHBDL3P58872 MIR4700-201ENST00000578311 74 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AC011447.4-201ENST00000587562 111 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.36□□□□□ -1.39
RHBDL3P58872 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 MIR8084-201ENST00000614105 89 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.36□□□□□ -1.39
RHBDL3P58872 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.36□□□□□ -1.39
RHBDL3P58872 AP001153.1-201ENST00000641024 338 ntBASIC6.36□□□□□ -1.39
RHBDL3P58872 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RHBDL3P58872 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.36□□□□□ -1.39
RHBDL3P58872 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RHBDL3P58872 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.36□□□□□ -1.39
RHBDL3P58872 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RHBDL3P58872 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.36□□□□□ -1.39
RHBDL3P58872 AC114947.2-201ENST00000565748 2125 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RHBDL3P58872 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RHBDL3P58872 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.35□□□□□ -1.39
RHBDL3P58872 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.35□□□□□ -1.39
RHBDL3P58872 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RHBDL3P58872 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.35□□□□□ -1.39
RHBDL3P58872 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.35□□□□□ -1.39
RHBDL3P58872 U3.3-201ENST00000362986 216 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.35□□□□□ -1.39
RHBDL3P58872 NCSTNP1-201ENST00000406229 144 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 RPL6P29-201ENST00000414863 865 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 AC092570.3-201ENST00000420113 693 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.35□□□□□ -1.39
RHBDL3P58872 EI24P4-201ENST00000423683 1078 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.35□□□□□ -1.39
RHBDL3P58872 UBE2V1P6-201ENST00000430840 422 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 AC092013.1-201ENST00000438795 332 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.35□□□□□ -1.39
RHBDL3P58872 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.35□□□□□ -1.39
RHBDL3P58872 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.35□□□□□ -1.39
RHBDL3P58872 AL589765.3-201ENST00000446084 462 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 RPL7L1P1-201ENST00000448259 785 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 RNU6-1218P-201ENST00000458990 108 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.35□□□□□ -1.39
RHBDL3P58872 AL671862.1-201ENST00000515851 349 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.35□□□□□ -1.39
RHBDL3P58872 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 MIR4420-201ENST00000583944 77 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 BNIP3P19-201ENST00000605397 577 ntBASIC6.35□□□□□ -1.39
RHBDL3P58872 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.35□□□□□ -1.39
RHBDL3P58872 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RHBDL3P58872 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RHBDL3P58872 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RHBDL3P58872 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RHBDL3P58872 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RHBDL3P58872 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 AC100757.1-201ENST00000616872 1835 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 AC008432.1-201ENST00000615912 1320 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 SNORD56.6-201ENST00000384569 71 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 AL645733.1-201ENST00000402250 217 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 RN7SKP126-201ENST00000411143 300 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.34□□□□□ -1.39
RHBDL3P58872 AL158050.1-201ENST00000416077 457 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.34□□□□□ -1.39
RHBDL3P58872 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.34□□□□□ -1.39
RHBDL3P58872 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RHBDL3P58872 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 RPL35AP28-201ENST00000459730 331 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 AC010627.1-201ENST00000503819 1294 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 RN7SKP67-201ENST00000515905 235 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.34□□□□□ -1.39
RHBDL3P58872 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.34□□□□□ -1.39
RHBDL3P58872 MIR3908-201ENST00000579798 126 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 MIR4646-201ENST00000580775 63 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 AC124856.1-201ENST00000600819 896 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 AC005776.1-201ENST00000603164 290 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 AC099494.2-201ENST00000623371 978 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 AC011815.3-201ENST00000624194 473 ntBASIC6.34□□□□□ -1.39
RHBDL3P58872 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RHBDL3P58872 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
RHBDL3P58872 AC107027.3-201ENST00000565095 3473 ntBASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms