Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.88□□□□□ -1.47
GFRA1P56159 AL596327.1-201ENST00000603629 213 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC019257.2-201ENST00000605539 497 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 RNU6-88P-201ENST00000606801 100 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AC024941.1-201ENST00000612250 334 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 AL080312.2-201ENST00000613001 630 ntBASIC5.88□□□□□ -1.47
GFRA1P56159 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA1P56159 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA1P56159 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.88□□□□□ -1.47
GFRA1P56159 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA1P56159 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.88□□□□□ -1.47
GFRA1P56159 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
GFRA1P56159 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GFRA1P56159 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 TMCC1P1-201ENST00000518897 1980 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC009120.2-204ENST00000621548 2032 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
GFRA1P56159 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.87□□□□□ -1.47
GFRA1P56159 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.87□□□□□ -1.47
GFRA1P56159 LINC01613-201ENST00000561476 2780 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA1P56159 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.87□□□□□ -1.47
GFRA1P56159 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GFRA1P56159 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
GFRA1P56159 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GFRA1P56159 AC007066.1-201ENST00000392902 381 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AL589647.1-201ENST00000402485 466 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 PRELID1P1-201ENST00000403549 660 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.87□□□□□ -1.47
GFRA1P56159 AL136133.1-201ENST00000413694 376 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 UBTFL3-201ENST00000418934 1024 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA1P56159 MTCO3P1-205ENST00000422088 832 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AL365184.2-201ENST00000431139 435 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA1P56159 AL831737.1-201ENST00000441288 271 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 RPL5P10-201ENST00000445207 894 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA1P56159 AL358876.1-201ENST00000453364 1075 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 NF1P3-201ENST00000457709 450 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 RN7SL39P-201ENST00000462264 297 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 UBTFL6-201ENST00000477929 1024 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC126182.1-201ENST00000478134 357 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 RPL7P6-201ENST00000480903 738 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 HMGN2P25-201ENST00000486956 268 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA1P56159 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA1P56159 AC109464.2-201ENST00000510242 943 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA1P56159 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.87□□□□□ -1.47
GFRA1P56159 OR52K3P-201ENST00000531655 943 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA1P56159 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GFRA1P56159 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA1P56159 AC122134.1-201ENST00000565664 1104 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA1P56159 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA1P56159 AC026898.1-201ENST00000586404 571 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC012065.4-201ENST00000602445 679 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AL109618.2-201ENST00000605527 211 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.87□□□□□ -1.47
GFRA1P56159 AC009779.8-202ENST00000607990 932 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.87□□□□□ -1.47
GFRA1P56159 AP001264.1-201ENST00000620602 703 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC095031.1-201ENST00000623685 672 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC120349.2-201ENST00000625002 298 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC026634.1-201ENST00000634369 198 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 MIR193BHG-214ENST00000641765 509 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 AC135352.1-201ENST00000506173 1418 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 AC022507.1-201ENST00000548349 1505 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 AC062022.1-201ENST00000451026 1684 ntBASIC5.87□□□□□ -1.47
GFRA1P56159 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GFRA1P56159 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms