Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNA5SP433-201ENST00000364491 114 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 SNORA51.12-201ENST00000384448 134 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC093719.1-202ENST00000392735 373 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.38□□□□□ -1.55
SUMO3P55854 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.38□□□□□ -1.55
SUMO3P55854 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.38□□□□□ -1.55
SUMO3P55854 BX284632.2-201ENST00000421091 399 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 RPL7P4-203ENST00000430239 730 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 RPS3AP38-201ENST00000435889 763 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC096775.1-201ENST00000437724 448 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 VN1R110P-201ENST00000438988 971 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AL512605.1-202ENST00000441919 381 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 SETD6P1-201ENST00000444575 317 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AL359955.2-201ENST00000445380 353 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 EXTL2P1-201ENST00000446218 416 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 Z83846.1-201ENST00000446798 265 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.38□□□□□ -1.55
SUMO3P55854 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 TPMTP4-201ENST00000450749 678 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 RNU1-88P-201ENST00000459274 128 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC011979.1-201ENST00000472300 483 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC090114.3-201ENST00000479267 829 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC099521.1-201ENST00000482557 334 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 RPL38P3-201ENST00000484463 213 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 RPL37P23-201ENST00000492641 294 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC005912.1-201ENST00000495392 255 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC025458.1-201ENST00000506046 166 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 TOMM22P4-201ENST00000511318 336 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 RNA5SP340-201ENST00000517132 107 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC008562.1-201ENST00000521763 330 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC090424.1-201ENST00000535243 736 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.38□□□□□ -1.55
SUMO3P55854 DUXAP6-201ENST00000553858 601 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.38□□□□□ -1.55
SUMO3P55854 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC068714.1-201ENST00000559623 800 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AADACP1-206ENST00000561502 1193 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 TXNP4-201ENST00000575018 310 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.38□□□□□ -1.55
SUMO3P55854 MRPS35P3-201ENST00000603189 709 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.38□□□□□ -1.55
SUMO3P55854 AC017037.3-201ENST00000625016 472 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
SUMO3P55854 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.38□□□□□ -1.55
SUMO3P55854 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 AL662795.2-201ENST00000624252 3706 ntBASIC5.38□□□□□ -1.55
SUMO3P55854 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SUMO3P55854 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SUMO3P55854 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.37□□□□□ -1.55
SUMO3P55854 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 TTC39DP-201ENST00000416781 1688 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 ASNSP1-204ENST00000641977 1664 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 AP005901.5-201ENST00000545779 1796 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SUMO3P55854 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 RNU6-304P-201ENST00000364855 107 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 RNU6-83P-201ENST00000384568 112 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SUMO3P55854 RNU2-6P-201ENST00000411404 190 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 COX7BP2-201ENST00000437976 242 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 FHP1-201ENST00000442741 703 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 OR6K5P-201ENST00000447050 945 ntBASIC5.37□□□□□ -1.55
SUMO3P55854 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.37□□□□□ -1.55
SUMO3P55854 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.37□□□□□ -1.55
SUMO3P55854 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms