Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL357515.1-201ENST00000402967 542 ntBASIC5.1□□□□□ -1.59
CDH6P55285 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH6P55285 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH6P55285 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH6P55285 OR2AH1P-201ENST00000425717 928 ntBASIC5.1□□□□□ -1.59
CDH6P55285 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH6P55285 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH6P55285 AC092647.3-201ENST00000443044 633 ntBASIC5.1□□□□□ -1.59
CDH6P55285 MYO5BP2-201ENST00000449815 1277 ntBASIC5.1□□□□□ -1.59
CDH6P55285 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.1□□□□□ -1.59
CDH6P55285 AC098583.1-201ENST00000480875 255 ntBASIC5.1□□□□□ -1.59
CDH6P55285 AC090686.1-201ENST00000481577 749 ntBASIC5.1□□□□□ -1.59
CDH6P55285 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH6P55285 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.1□□□□□ -1.59
CDH6P55285 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH6P55285 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH6P55285 AC147055.3-201ENST00000510547 851 ntBASIC5.1□□□□□ -1.59
CDH6P55285 RN7SKP147-201ENST00000517154 244 ntBASIC5.1□□□□□ -1.59
CDH6P55285 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDH6P55285 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH6P55285 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH6P55285 SDR42E1P1-201ENST00000611327 477 ntBASIC5.1□□□□□ -1.59
CDH6P55285 EIF3FP1-201ENST00000613970 806 ntBASIC5.1□□□□□ -1.59
CDH6P55285 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH6P55285 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.1□□□□□ -1.59
CDH6P55285 AP003400.2-201ENST00000624036 666 ntBASIC5.1□□□□□ -1.59
CDH6P55285 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH6P55285 AC107068.1-201ENST00000563286 4218 ntBASIC5.1□□□□□ -1.59
CDH6P55285 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH6P55285 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH6P55285 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDH6P55285 TCP1P3-201ENST00000414406 1498 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC007996.1-201ENST00000620414 2821 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC109780.1-201ENST00000451768 1344 ntBASIC5.09□□□□□ -1.59
CDH6P55285 PCAT14-202ENST00000627127 3935 ntBASIC5.09□□□□□ -1.59
CDH6P55285 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH6P55285 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH6P55285 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CDH6P55285 MIR137-201ENST00000385223 102 ntBASIC5.09□□□□□ -1.59
CDH6P55285 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDH6P55285 VDAC2P1-201ENST00000399358 958 ntBASIC5.09□□□□□ -1.59
CDH6P55285 CHMP1B2P-201ENST00000399581 597 ntBASIC5.09□□□□□ -1.59
CDH6P55285 RPL23AP27-201ENST00000415161 451 ntBASIC5.09□□□□□ -1.59
CDH6P55285 TBCAP2-201ENST00000416175 326 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC093162.1-201ENST00000419682 124 ntBASIC5.09□□□□□ -1.59
CDH6P55285 CEACAMP7-201ENST00000444105 496 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH6P55285 AL589765.3-201ENST00000446084 462 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC000111.2-201ENST00000448200 210 ntBASIC5.09□□□□□ -1.59
CDH6P55285 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH6P55285 RN7SL97P-201ENST00000486780 299 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH6P55285 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH6P55285 RNA5SP303-201ENST00000516192 130 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH6P55285 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CDH6P55285 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH6P55285 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH6P55285 AP002884.5-201ENST00000595053 1132 ntBASIC5.09□□□□□ -1.59
CDH6P55285 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH6P55285 AC016769.4-201ENST00000616893 535 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC243960.7-201ENST00000623532 707 ntBASIC5.09□□□□□ -1.59
CDH6P55285 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH6P55285 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.09□□□□□ -1.59
CDH6P55285 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CDH6P55285 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CDH6P55285 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CDH6P55285 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH6P55285 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH6P55285 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 DDX18P5-201ENST00000534547 1306 ntBASIC5.08□□□□□ -1.6
CDH6P55285 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CDH6P55285 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH6P55285 Z68694.1-201ENST00000413929 841 ntBASIC5.08□□□□□ -1.6
CDH6P55285 TMBIM7P-201ENST00000418074 855 ntBASIC5.08□□□□□ -1.6
CDH6P55285 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH6P55285 AC116562.1-201ENST00000485355 781 ntBASIC5.08□□□□□ -1.6
CDH6P55285 MRPS33P2-201ENST00000507850 322 ntBASIC5.08□□□□□ -1.6
CDH6P55285 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH6P55285 Y_RNA.719-201ENST00000517156 106 ntBASIC5.08□□□□□ -1.6
CDH6P55285 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH6P55285 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH6P55285 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH6P55285 VN1R81P-201ENST00000602085 372 ntBASIC5.08□□□□□ -1.6
CDH6P55285 AC087763.1-201ENST00000603391 286 ntBASIC5.08□□□□□ -1.6
CDH6P55285 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH6P55285 AC138627.1-204ENST00000641894 765 ntBASIC5.08□□□□□ -1.6
CDH6P55285 AC008758.3-201ENST00000507003 1829 ntBASIC5.08□□□□□ -1.6
CDH6P55285 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH6P55285 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH6P55285 CASC19-281ENST00000642118 1554 ntBASIC5.08□□□□□ -1.6
CDH6P55285 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH6P55285 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CDH6P55285 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms