Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 AC090142.2-201ENST00000483263 416 ntBASIC5.09□□□□□ -1.59
CDH4P55283 GAPDHP56-201ENST00000506031 988 ntBASIC5.09□□□□□ -1.59
CDH4P55283 RFPL4AP5-201ENST00000514977 504 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AL358913.1-201ENST00000554342 121 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH4P55283 AC127024.5-201ENST00000580085 462 ntBASIC5.09□□□□□ -1.59
CDH4P55283 MIR4436B2-201ENST00000581415 91 ntBASIC5.09□□□□□ -1.59
CDH4P55283 MIR4436B1-201ENST00000583272 91 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AL445528.2-201ENST00000620582 470 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AC019206.1-201ENST00000621938 425 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AC087821.1-201ENST00000623639 567 ntBASIC5.09□□□□□ -1.59
CDH4P55283 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH4P55283 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH4P55283 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
CDH4P55283 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.09□□□□□ -1.6
CDH4P55283 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CDH4P55283 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.09□□□□□ -1.6
CDH4P55283 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.09□□□□□ -1.6
CDH4P55283 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH4P55283 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 AC092376.2-201ENST00000622621 4116 ntBASIC5.08□□□□□ -1.6
CDH4P55283 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 AC104623.2-202ENST00000623477 4002 ntBASIC5.08□□□□□ -1.6
CDH4P55283 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CDH4P55283 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 MTCO1P15-201ENST00000529569 1526 ntBASIC5.08□□□□□ -1.6
CDH4P55283 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH4P55283 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 AC099654.2-201ENST00000433031 1980 ntBASIC5.08□□□□□ -1.6
CDH4P55283 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 RN7SKP74-201ENST00000362849 309 ntBASIC5.08□□□□□ -1.6
CDH4P55283 RN7SKP149-201ENST00000363008 344 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CDH4P55283 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH4P55283 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH4P55283 OR6C71P-201ENST00000432580 913 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AC073648.4-201ENST00000442655 781 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AC021660.1-201ENST00000465006 554 ntBASIC5.08□□□□□ -1.6
CDH4P55283 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH4P55283 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH4P55283 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH4P55283 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH4P55283 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH4P55283 BTF3P13-201ENST00000513224 490 ntBASIC5.08□□□□□ -1.6
CDH4P55283 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH4P55283 AP000859.1-201ENST00000525536 307 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AC021006.3-201ENST00000530771 192 ntBASIC5.08□□□□□ -1.6
CDH4P55283 GCSHP4-201ENST00000538792 439 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.08□□□□□ -1.6
CDH4P55283 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH4P55283 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH4P55283 MIR3934-201ENST00000579806 107 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.08□□□□□ -1.6
CDH4P55283 AL158062.1-201ENST00000619632 745 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AC087385.3-201ENST00000620477 187 ntBASIC5.08□□□□□ -1.6
CDH4P55283 AP000648.2-201ENST00000624182 404 ntBASIC5.08□□□□□ -1.6
CDH4P55283 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH4P55283 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH4P55283 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CDH4P55283 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH4P55283 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH4P55283 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 IRF5P1-201ENST00000504852 2164 ntBASIC5.07□□□□□ -1.6
CDH4P55283 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDH4P55283 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 HMGB3P7-201ENST00000400214 611 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AL358178.1-201ENST00000407698 397 ntBASIC5.07□□□□□ -1.6
CDH4P55283 SEPT7P8-201ENST00000413308 775 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AC007738.1-201ENST00000413892 348 ntBASIC5.07□□□□□ -1.6
CDH4P55283 GTF2IP5-201ENST00000414608 731 ntBASIC5.07□□□□□ -1.6
CDH4P55283 QRSL1P2-201ENST00000418582 964 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AC013429.2-201ENST00000418798 781 ntBASIC5.07□□□□□ -1.6
CDH4P55283 MTCO3P17-201ENST00000443775 513 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH4P55283 MRPL35P2-201ENST00000448009 511 ntBASIC5.07□□□□□ -1.6
CDH4P55283 RPS3AP41-201ENST00000462701 778 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AC073073.1-201ENST00000493920 463 ntBASIC5.07□□□□□ -1.6
CDH4P55283 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.07□□□□□ -1.6
CDH4P55283 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH4P55283 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.07□□□□□ -1.6
CDH4P55283 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.07□□□□□ -1.6
CDH4P55283 BRD9P1-201ENST00000529855 560 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.07□□□□□ -1.6
CDH4P55283 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.07□□□□□ -1.6
CDH4P55283 DUX4L52-201ENST00000549363 777 ntBASIC5.07□□□□□ -1.6
CDH4P55283 AC104687.2-201ENST00000604442 342 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms