Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.84□□□□□ -1.47
NUP98P52948 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP98P52948 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.84□□□□□ -1.47
NUP98P52948 AC067959.1-201ENST00000604334 379 ntBASIC5.84□□□□□ -1.47
NUP98P52948 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.84□□□□□ -1.47
NUP98P52948 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.84□□□□□ -1.48
NUP98P52948 AC005005.4-201ENST00000623789 16698 ntBASIC5.84□□□□□ -1.48
NUP98P52948 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
NUP98P52948 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
NUP98P52948 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
NUP98P52948 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NUP98P52948 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NUP98P52948 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP98P52948 Y_RNA.126-201ENST00000363382 111 ntBASIC5.83□□□□□ -1.48
NUP98P52948 RNA5SP515-201ENST00000364570 118 ntBASIC5.83□□□□□ -1.48
NUP98P52948 U3.35-201ENST00000408405 208 ntBASIC5.83□□□□□ -1.48
NUP98P52948 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP98P52948 RPL10P17-201ENST00000453852 316 ntBASIC5.83□□□□□ -1.48
NUP98P52948 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.83□□□□□ -1.48
NUP98P52948 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NUP98P52948 AC105031.1-201ENST00000518550 476 ntBASIC5.83□□□□□ -1.48
NUP98P52948 AC134698.5-201ENST00000519444 336 ntBASIC5.83□□□□□ -1.48
NUP98P52948 RPL23AP53-201ENST00000521854 457 ntBASIC5.83□□□□□ -1.48
NUP98P52948 AP000648.2-201ENST00000624182 404 ntBASIC5.83□□□□□ -1.48
NUP98P52948 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP98P52948 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP98P52948 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
NUP98P52948 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.83□□□□□ -1.48
NUP98P52948 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP98P52948 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP98P52948 AL031119.1-201ENST00000404707 1879 ntBASIC5.83□□□□□ -1.48
NUP98P52948 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NUP98P52948 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP98P52948 AC073342.2-201ENST00000595842 1800 ntBASIC5.83□□□□□ -1.48
NUP98P52948 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NUP98P52948 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NUP98P52948 RPL23AP59-201ENST00000399415 461 ntBASIC5.83□□□□□ -1.48
NUP98P52948 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP98P52948 AC245028.2-201ENST00000458673 253 ntBASIC5.83□□□□□ -1.48
NUP98P52948 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NUP98P52948 AC023424.1-201ENST00000496058 459 ntBASIC5.83□□□□□ -1.48
NUP98P52948 CYCSP29-201ENST00000533731 318 ntBASIC5.83□□□□□ -1.48
NUP98P52948 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP98P52948 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NUP98P52948 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.83□□□□□ -1.48
NUP98P52948 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.83□□□□□ -1.48
NUP98P52948 AC090948.1-201ENST00000607464 549 ntBASIC5.83□□□□□ -1.48
NUP98P52948 AC092653.1-201ENST00000608509 531 ntBASIC5.83□□□□□ -1.48
NUP98P52948 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NUP98P52948 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NUP98P52948 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 NOL8P1-201ENST00000508336 3529 ntBASIC5.82□□□□□ -1.48
NUP98P52948 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP98P52948 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP98P52948 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP98P52948 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP98P52948 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.82□□□□□ -1.48
NUP98P52948 AC015912.2-201ENST00000571053 181 ntBASIC5.82□□□□□ -1.48
NUP98P52948 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.82□□□□□ -1.48
NUP98P52948 AC093765.1-201ENST00000603758 881 ntBASIC5.82□□□□□ -1.48
NUP98P52948 AL591034.3-201ENST00000605511 685 ntBASIC5.82□□□□□ -1.48
NUP98P52948 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NUP98P52948 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.82□□□□□ -1.48
NUP98P52948 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.81□□□□□ -1.48
NUP98P52948 AC009951.1-201ENST00000623674 2614 ntBASIC5.81□□□□□ -1.48
NUP98P52948 AC021146.4-201ENST00000309229 279 ntBASIC5.81□□□□□ -1.48
NUP98P52948 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP98P52948 TMSB10P2-201ENST00000416049 131 ntBASIC5.81□□□□□ -1.48
NUP98P52948 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.81□□□□□ -1.48
NUP98P52948 RNA5SP464-201ENST00000516251 108 ntBASIC5.81□□□□□ -1.48
NUP98P52948 TOMM20P2-201ENST00000540082 421 ntBASIC5.81□□□□□ -1.48
NUP98P52948 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP98P52948 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP98P52948 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.81□□□□□ -1.48
NUP98P52948 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.81□□□□□ -1.48
NUP98P52948 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.81□□□□□ -1.48
NUP98P52948 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 AC016717.3-201ENST00000624730 554 ntBASIC5.81□□□□□ -1.48
NUP98P52948 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
NUP98P52948 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.81□□□□□ -1.48
NUP98P52948 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
NUP98P52948 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NUP98P52948 OR6C69P-201ENST00000394268 893 ntBASIC5.81□□□□□ -1.48
NUP98P52948 ST13P16-201ENST00000401760 781 ntBASIC5.81□□□□□ -1.48
NUP98P52948 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.81□□□□□ -1.48
NUP98P52948 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.81□□□□□ -1.48
NUP98P52948 ACTR3P2-201ENST00000439585 1257 ntBASIC5.81□□□□□ -1.48
NUP98P52948 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms