Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX1P48742 HMGB1P4-201ENST00000455362 567 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX1P48742 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX1P48742 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 AC012339.2-201ENST00000523996 453 ntBASIC5.33□□□□□ -1.56
LHX1P48742 BRD9P1-201ENST00000529855 560 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AC074029.2-201ENST00000551045 634 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.33□□□□□ -1.56
LHX1P48742 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.33□□□□□ -1.56
LHX1P48742 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX1P48742 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.33□□□□□ -1.56
LHX1P48742 TVP23CP2-201ENST00000571473 623 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.33□□□□□ -1.56
LHX1P48742 EIF1P5-201ENST00000585002 234 ntBASIC5.33□□□□□ -1.56
LHX1P48742 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 AC015802.5-201ENST00000607478 399 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AL592494.3-201ENST00000609485 464 ntBASIC5.33□□□□□ -1.56
LHX1P48742 AL162574.2-201ENST00000614618 657 ntBASIC5.33□□□□□ -1.56
LHX1P48742 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LHX1P48742 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
LHX1P48742 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LHX1P48742 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
LHX1P48742 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
LHX1P48742 AL356317.1-201ENST00000396110 1436 ntBASIC5.32□□□□□ -1.56
LHX1P48742 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.32□□□□□ -1.56
LHX1P48742 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
LHX1P48742 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.32□□□□□ -1.56
LHX1P48742 TRIM51GP-201ENST00000534741 1350 ntBASIC5.32□□□□□ -1.56
LHX1P48742 ADAM24P-201ENST00000398655 2101 ntBASIC5.32□□□□□ -1.56
LHX1P48742 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.32□□□□□ -1.56
LHX1P48742 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
LHX1P48742 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.32□□□□□ -1.56
LHX1P48742 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 SNORA70.10-201ENST00000384515 134 ntBASIC5.32□□□□□ -1.56
LHX1P48742 RNU6-883P-201ENST00000384597 107 ntBASIC5.32□□□□□ -1.56
LHX1P48742 ST13P16-201ENST00000401760 781 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AMZ2P2-201ENST00000406819 1057 ntBASIC5.32□□□□□ -1.56
LHX1P48742 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.32□□□□□ -1.56
LHX1P48742 HYALP1-201ENST00000417674 1279 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AF186996.5-201ENST00000418098 904 ntBASIC5.32□□□□□ -1.56
LHX1P48742 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.32□□□□□ -1.56
LHX1P48742 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.32□□□□□ -1.56
LHX1P48742 RPL7P11-201ENST00000437586 658 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.32□□□□□ -1.56
LHX1P48742 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.32□□□□□ -1.56
LHX1P48742 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.32□□□□□ -1.56
LHX1P48742 AC112498.1-201ENST00000444401 332 ntBASIC5.32□□□□□ -1.56
LHX1P48742 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.32□□□□□ -1.56
LHX1P48742 BUD31P2-201ENST00000449374 300 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.32□□□□□ -1.56
LHX1P48742 STRADBP1-201ENST00000478954 1281 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.32□□□□□ -1.56
LHX1P48742 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.32□□□□□ -1.56
LHX1P48742 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.32□□□□□ -1.56
LHX1P48742 PCNAP1-201ENST00000505363 709 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AC020937.1-201ENST00000519677 1013 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.32□□□□□ -1.56
LHX1P48742 AC100784.1-201ENST00000522790 310 ntBASIC5.32□□□□□ -1.56
LHX1P48742 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.32□□□□□ -1.56
LHX1P48742 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 AC040958.1-201ENST00000561102 201 ntBASIC5.32□□□□□ -1.56
LHX1P48742 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LHX1P48742 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.32□□□□□ -1.56
LHX1P48742 AL159169.2-201ENST00000610061 1269 ntBASIC5.32□□□□□ -1.56
LHX1P48742 OR8G7P-201ENST00000616658 848 ntBASIC5.32□□□□□ -1.56
LHX1P48742 HPVC1-201ENST00000629899 1198 ntBASIC5.32□□□□□ -1.56
LHX1P48742 AC091948.2-201ENST00000636510 279 ntBASIC5.32□□□□□ -1.56
LHX1P48742 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
LHX1P48742 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 ECM1P2-201ENST00000503354 1577 ntBASIC5.32□□□□□ -1.56
LHX1P48742 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LHX1P48742 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LHX1P48742 AC008079.2-201ENST00000623543 20396 ntBASIC5.32□□□□□ -1.56
LHX1P48742 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LHX1P48742 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LHX1P48742 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 AC006484.1-201ENST00000435086 1884 ntBASIC5.31□□□□□ -1.56
LHX1P48742 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.31□□□□□ -1.56
LHX1P48742 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
LHX1P48742 RN7SKP149-201ENST00000363008 344 ntBASIC5.31□□□□□ -1.56
LHX1P48742 AL672167.2-201ENST00000377164 879 ntBASIC5.31□□□□□ -1.56
LHX1P48742 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.31□□□□□ -1.56
LHX1P48742 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.31□□□□□ -1.56
LHX1P48742 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.31□□□□□ -1.56
LHX1P48742 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.31□□□□□ -1.56
LHX1P48742 CR848007.2-201ENST00000424918 787 ntBASIC5.31□□□□□ -1.56
LHX1P48742 RNF19BPX-201ENST00000426224 625 ntBASIC5.31□□□□□ -1.56
LHX1P48742 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms