Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CSNK1A1P48729 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CSNK1A1P48729 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CSNK1A1P48729 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CSNK1A1P48729 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CSNK1A1P48729 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.46□□□□□ -1.69
CSNK1A1P48729 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CSNK1A1P48729 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.46□□□□□ -1.69
CSNK1A1P48729 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CSNK1A1P48729 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CSNK1A1P48729 THAP12P4-201ENST00000528321 2266 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AL731532.2-201ENST00000623542 1953 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC011447.7-201ENST00000624228 1590 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 SNORA70.10-201ENST00000384515 134 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 RAB9AP4-201ENST00000415230 609 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC104333.2-201ENST00000422630 192 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC005033.1-201ENST00000428904 813 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 TMX2P1-201ENST00000436507 708 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 RPS29P9-201ENST00000440360 171 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 MTND4LP12-201ENST00000448237 295 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 TPT1P1-201ENST00000458495 518 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 RN7SL629P-201ENST00000489622 285 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 RN7SL244P-201ENST00000493405 297 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC006499.3-201ENST00000506077 748 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 NPM1P52-201ENST00000518264 846 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AP006245.2-201ENST00000522004 300 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 OR10G5P-201ENST00000532733 358 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 OR7E128P-201ENST00000532736 1024 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 RN7SL753P-201ENST00000581238 290 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC011840.5-201ENST00000582125 771 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC105254.2-201ENST00000603636 436 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC009163.6-201ENST00000612367 342 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CSNK1A1P48729 AC107027.3-201ENST00000565095 3473 ntBASIC4.46□□□□□ -1.7
CSNK1A1P48729 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CSNK1A1P48729 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
CSNK1A1P48729 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 AP001642.1-201ENST00000624727 2117 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 Z97832.1-201ENST00000402490 328 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 AL121578.1-201ENST00000428051 892 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 RPL35AP21-201ENST00000437667 333 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 OR7E125P-201ENST00000443450 846 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 TCEA1P1-201ENST00000449716 880 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 IGHV5-78-201ENST00000450948 295 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 HMGB1P4-201ENST00000455362 567 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 RNA5SP103-201ENST00000459503 118 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 COX6B1P5-201ENST00000509843 249 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 AC018442.3-201ENST00000523025 183 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 AC012339.2-201ENST00000523996 453 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 AGGF1P9-201ENST00000561884 913 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 EIF1P5-201ENST00000585002 234 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 AC006116.3-201ENST00000592968 361 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 AL355480.1-201ENST00000629041 99 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 CIR1P2-201ENST00000514821 1342 ntBASIC4.45□□□□□ -1.7
CSNK1A1P48729 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.45□□□□□ -1.7
CSNK1A1P48729 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CSNK1A1P48729 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CSNK1A1P48729 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CSNK1A1P48729 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms